DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and sea-1

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_494611.1 Gene:sea-1 / 173710 WormBaseID:WBGene00004750 Length:376 Species:Caenorhabditis elegans


Alignment Length:353 Identity:82/353 - (23%)
Similarity:134/353 - (37%) Gaps:94/353 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SNSSTSSISNPSCPDQSSSSSSSSVSLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSASTASKK 157
            |.|..||.|.||.|..||...||  |.||: |...|...:||......:...            .
 Worm    38 STSRPSSSSPPSLPAVSSELLSS--SFPTN-APESSSRDLAPKQNQFTINVV------------L 87

  Fly   158 FKGQHKK--DNNSAENG-------------------TVKPNSHNISKGESEPVHPSLA------- 194
            |..:.||  :.|...||                   ::...|..:...|||.|..|.:       
 Worm    88 FDEKKKKNPEENLPANGDQLATLRSLMMQINPSSPPSIPATSPQLPLAESENVPESSSTLKDHKF 152

  Fly   195 ------------QAI-VVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMM 246
                        .|: :.|..:..|.:||..||||::..:|||:||....::.|||||..|...:
 Worm   153 SLNTMLFNVKKNDAVKISLANQEQWAKFHEIGTEMMVFNSGRRLFPLLAYKVSGLDPHKLYCAGV 217

  Fly   247 DFVPMDDKRYRYAFHNSC--WVVAGKADPISPPRIHVHPDSPAVG--SNWMKQI---VSFDKLKL 304
            ..:|  |..|:..:.:..  ||     :.::..:....|.|..:|  .|..|.:   :....:|:
 Worm   218 HMIP--DSAYKQEYDHDLQQWV-----NCLNQKKTIFKPTSEILGRIENGFKLMSLGIDMSDVKI 275

  Fly   305 TN----------------NQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIF 353
            .|                ..||:...:::  .::|.|...:..|  .|:.:::.|    .....|
 Worm   276 FNIAIRKKTPLQIEKSRKPNLDKTIEVLI--QYKYLPVIKIYEL--SNSGMEKKE----IAQATF 332

  Fly   354 PETSFTAVTAYQNQRVTQLKISSNPFAK 381
            |||||..|:.|:||::.::|...|.:.:
 Worm   333 PETSFVTVSIYRNQKIKEMKTLGNKYCR 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 51/211 (24%)
sea-1NP_494611.1 TBOX 167..369 CDD:214656 50/209 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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