DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx3b

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_002662050.2 Gene:tbx3b / 100334188 ZFINID:ZDB-GENE-060531-144 Length:594 Species:Danio rerio


Alignment Length:568 Identity:173/568 - (30%)
Similarity:248/568 - (43%) Gaps:139/568 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 EPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPM 251
            :||.....:.:|.||...||.|||..||||:|||:||||||.|:||..|.|..|.||.:||.|..
Zfish    63 DPVQTPEDEPVVHLEGNELWGQFHKVGTEMVITKSGRRMFPAFKVRCSGFDRKARYILLMDIVAS 127

  Fly   252 DDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHII 316
            ||  |||.|||..|:|||||||..|.|:::|||||:.|..||.:.|:|.|||||||..|::|..|
Zfish   128 DD--YRYKFHNCRWMVAGKADPEMPKRMYIHPDSPSTGEQWMSKAVTFHKLKLTNNISDKHGFTI 190

  Fly   317 LNSMHRYQPRFHLV------YLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKIS 375
            |||||:||||||:|      .||           .|.|:|::||||.|.|||||||:::|||||.
Zfish   191 LNSMHKYQPRFHIVRANDVLKLP-----------YSTFKTYVFPETEFIAVTAYQNEKITQLKID 244

  Fly   376 SNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQ------L 434
            :||||||||:       ||.|      ..|.:.:|..|:.:.:.::..:........|      :
Zfish   245 NNPFAKGFRE-------TGNG------RREKRKQMLHQRCEVEPKKASVLTDDSSFDQISSNYLI 296

  Fly   435 KERTAATS-----------NFGLSCSELAIEQ-QQQQQQQQGVLQLPATPSSSSTSGNSPDLLGY 487
            :|....||           .||.......:|. |...|.:|...::..|...|....|. ::...
Zfish   297 QESNVVTSTSTDTNESDIDGFGDEKESNEVESIQSISQDEQNSREISTTVQESKDDPNE-EIGDR 360

  Fly   488 QMEQQLQQQHQQQQ------QQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQAQVQ 546
            ..|...::||..:|      .::|..||:.......|:|:.||.:    |..:.:.......::.
Zfish   361 NPEINSKKQHSVEQPAHLPLDKKHAEQQKFAADVTDASQKDSLAR----HFYFPTPGLINSLRLP 421

  Fly   547 SH--------------PLTPHSSSSASPPATAAPGASAATAAVAGGAGAAGAGGATSATQ----- 592
            ||              ||....::.:..|..:..|              .|.|..||.:.     
Zfish   422 SHVLSNLCQFNYVGTLPLLASEATGSWIPRRSNEG--------------EGQGYTTSVSSSQQRL 472

  Fly   593 ---------------------VMSAANIYSSIGQPYAQEQSNFGAIYHHNAAAAAAAHYHHGHAH 636
                                 |.:..||:     ||.|:.....|     .:::||::..|....
Zfish   473 TGMQDLPPNFQQHRMTSQGVLVSAQGNIF-----PYPQDYMTTSA-----GSSSAASYQVHRQPF 527

  Fly   637 GHAHSHAHAH-------AHG---PYASA----YDKLKVSRHAAAAAYG 670
            .:........       .||   |..::    |.:..::.||:.|..|
Zfish   528 FNISYRPQCRPYPVPVWVHGRKIPQTTSVLIPYGETDINEHASIATPG 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 112/199 (56%)
tbx3bXP_002662050.2 TBOX 74..256 CDD:238106 112/201 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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