DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and eomes

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001122124.1 Gene:eomes / 100038065 XenbaseID:XB-GENE-479769 Length:667 Species:Xenopus tropicalis


Alignment Length:641 Identity:174/641 - (27%)
Similarity:245/641 - (38%) Gaps:193/641 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QTAGKDRSSYKPLEQIDAKLADIETHSTGSTGTANSN--SSTS---SISNPSCPDQSSSSSSSSV 117
            |..|:....|....|:|:      ....|||.||:..  |.|.   |::. :.||.....|.|: 
 Frog    41 QHKGQQHKKYSRGLQLDS------PREPGSTSTASGTMLSETGEAFSVAK-TLPDNGRKGSPSA- 97

  Fly   118 SLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSAS--TASKKF----KGQHKKDNNSAENGT--- 173
                     ..|.|       |||.:::...:.:|  .||:::    :|| :....:.|.|:   
 Frog    98 ---------EEELS-------TAVPSSAPRYLDSSLQAASERYYLQPQGQ-QPQQAATELGSPCS 145

  Fly   174 ---VKPNSHNI------------------SKGESEPVHPSLAQ---------------------- 195
               ..|..|:.                  ..|.|.||.||..|                      
 Frog   146 IFPYAPPQHSAVYPAGGAARYPPYGSMLPPAGFSPPVCPSRPQYSSGYQYSQAPGTMYSPYPPAG 210

  Fly   196 ------------------AIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATY 242
                              |.|.|..:.||.:||...|||||||.||||||.....|.||:|.|.|
 Frog   211 TGSGLSALGLPGGGAGVRAQVFLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNITGLNPTAHY 275

  Fly   243 ICMMDFVPMDDKRYRYAFHNSCWVVAGKAD-PISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTN 306
            ...::.|..|...:|  |....||..|||| .:...:::|||:||..|::||:|.:||.||||||
 Frog   276 NVFVEVVLADPNHWR--FQGGKWVTCGKADNNMQGNKVYVHPESPNTGAHWMRQEISFGKLKLTN 338

  Fly   307 NQLDENGH---IILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQR 368
            |:...|..   |:|.|:|:||||.|:|.:  ....:::...|:..:||.||||.|.|||||||..
 Frog   339 NKGANNNSTQMIVLQSLHKYQPRLHIVEV--SEDGVEDLNDSAKSQTFTFPETQFIAVTAYQNTD 401

  Fly   369 VTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQ------QQQQQQQQQQQLQQQ 427
            :|||||..|||||||||: .:.:.|...|...:.|.....|..|      ...|...|.|.:...
 Frog   402 ITQLKIDHNPFAKGFRDN-YDSMYTASESDRLTPSPADSPRSHQIVPGTRYSVQPFFQDQFVNNL 465

  Fly   428 QQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQ 492
            ...:....|||...:|                    |:|    :|.::....|:|....:....|
 Frog   466 PPARYYSGERTVPQAN--------------------GLL----SPQTNDEVANAPPQRWFVTPVQ 506

  Fly   493 LQQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQAQVQSHPLTPHSSSS 557
                                             |.:.|....|:|.            |.:||.|
 Frog   507 ---------------------------------QAAANKLDMGAYE------------TDYSSGS 526

  Fly   558 -------ASPPATAAPGASAATAAVAGGAGAAGAGGATSATQVMSAANIYSSIGQP 606
                   :.|..|:.|.|....||.|..|| .|:.|:|...: |:....:||...|
 Frog   527 LLTYGIKSLPIQTSHPMAYYPDAAFASMAG-WGSRGSTYQRK-MTTTLPWSSRSSP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 95/237 (40%)
eomesNP_001122124.1 T-box 231..418 CDD:366363 91/190 (48%)
T-box_assoc 444..665 CDD:374412 38/208 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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