DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbxtb

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_001343633.3 Gene:tbxtb / 100004296 ZFINID:ZDB-GENE-081028-48 Length:424 Species:Danio rerio


Alignment Length:418 Identity:133/418 - (31%)
Similarity:189/418 - (45%) Gaps:68/418 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 SEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVP 250
            ||...|:..:..|.|:...||.:|.|...|||:||.||||||..:|.|.||||:|.|..::||||
Zfish    30 SEKGDPTERELKVALDENELWQKFKALTNEMIVTKNGRRMFPVLKVNISGLDPNAMYSFLLDFVP 94

  Fly   251 MDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHI 315
            .|:.|::|.  |..||..||.:|.:|..:::|||||..|::|||..|||.|:||| |:|:..|.|
Zfish    95 ADNHRWKYV--NGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKSCVSFSKVKLT-NKLNGGGQI 156

  Fly   316 ILNSMHRYQPRFHLVYL--PPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNP 378
            :|||:|:|:||.|:|.:  |.:..:           |..||||.|.|||||||:.:|.|||..||
Zfish   157 MLNSLHKYEPRIHIVRVGGPQRMIT-----------THAFPETQFIAVTAYQNEEITSLKIKYNP 210

  Fly   379 FAKGFRD-----------DGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQ 432
            |||.|.|           :..::....|.|.:||....|..              .|........
Zfish   211 FAKAFLDTKERSDHKEIIEDVSESQQSGYSQLSSWFLPSAG--------------SLCPSANPHA 261

  Fly   433 QLKERTAATSNFGLSCSELA-IEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQ 496
            ||....:.:::.|  |...: :...:............|:|:..|.|.:...:|         ..
Zfish   262 QLNSALSLSTSHG--CERYSTLRGHRSAPYPSTYAHRTASPTGYSDSSSCLSML---------PS 315

  Fly   497 HQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQ-----NHTQYGSYHHAYQAQV----------Q 546
            |......|..|....|...|.:....:..|.:.     |.:|.||...:..:|.          .
Zfish   316 HDNWSSLQMSSHSSVLPMGHSSGPNSNTSQYTSLWSVGNSSQSGSMSSSLGSQFLRGSAGHYSSL 380

  Fly   547 SHPLTPHSSSSASPPATAAPGASAATAA 574
            :||||..||.|......|:..:...|||
Zfish   381 AHPLTAPSSGSPLYDTAASEASEYDTAA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 93/206 (45%)
tbxtbXP_001343633.3 TBOX 40..221 CDD:238106 93/194 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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