DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbx5b

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001185700.1 Gene:tbx5b / 100004161 ZFINID:ZDB-GENE-060601-2 Length:422 Species:Danio rerio


Alignment Length:410 Identity:146/410 - (35%)
Similarity:207/410 - (50%) Gaps:67/410 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 KKDNNSAENGTVKPNSHNISKGESEPVHPSLAQAI-----VVLETKALWDQFHAQGTEMIITKTG 222
            ::|.:|..:|.        :|..|.|:...|:|..     |.|..|.||.:||...|||||||.|
Zfish    23 ERDKDSGHHGR--------NKTGSPPLQTQLSQQSMEGIKVYLHEKDLWAKFHDVTTEMIITKAG 79

  Fly   223 RRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPA 287
            |||||:::|::.||:|.|.||.:||.:..|:.||::|  ::.|.::|||:|..|.|::|||||||
Zfish    80 RRMFPSYKVKVTGLNPKAKYILLMDIISADEHRYKFA--DNKWSISGKAEPAIPGRLYVHPDSPA 142

  Fly   288 VGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFI 352
            .|::||:|:|||.|||||||.||..|||||||||:||||.|:|....:|:....|   :.|.|..
Zfish   143 SGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADERNSFGSSN---TSFCTHS 204

  Fly   353 FPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQ 417
            |.||:|.|||:|||..:|||||.:||||||||  |.:|:.....|...|..:....|...:|:..
Zfish   205 FAETTFIAVTSYQNHTITQLKIENNPFAKGFR--GNDDIELHRMSRTPSKEYPLVPRSTARQRAA 267

  Fly   418 QQQQQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSP 482
            ......|.:.:....|       ..:.|.:||:.:.:|           .|..|||.     :.|
Zfish   268 PPSPDCLSRSEYTVTQ-------KPSPGFTCSDTSGDQ-----------SLTETPSI-----HDP 309

  Fly   483 --DLLGYQMEQQLQQQHQQQQQQQ---HQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQ 542
              .|..||:...:........|.|   :...|..:.:...|:...|        |.|.|:..|.:
Zfish   310 TYPLFSYQLSPDVAPSSMDTTQHQPCMYGGSQVGMEELRWASYSDS--------TTYQSFSSAKE 366

  Fly   543 AQVQSHPLTPHSSSSASPPA 562
                       .|.:..|||
Zfish   367 -----------MSGTFVPPA 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 107/198 (54%)
tbx5bNP_001185700.1 TBOX 52..240 CDD:238106 106/194 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003320
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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