DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1440 and nfrkb

DIOPT Version :9

Sequence 1:NP_001285018.1 Gene:CG1440 / 31776 FlyBaseID:FBgn0030038 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_989207.1 Gene:nfrkb / 394815 XenbaseID:XB-GENE-6258496 Length:1265 Species:Xenopus tropicalis


Alignment Length:396 Identity:75/396 - (18%)
Similarity:126/396 - (31%) Gaps:135/396 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 YWDKIERCNYFLNNVVKTAQRGEKVDGRLVSFLLLDPTSDGGQWDMLVNLITK----------HG 255
            :::.:.|..:  .||:..:||     ..|..||.:.|..:..|.:.::..:.:          | 
 Frog    49 FFEVVSRDTW--KNVLSDSQR-----EHLKQFLPVFPDDNANQQEKIIQSLFRGDNFRFGNPLH- 105

  Fly   256 LMPKKCFPES-FSCESSLRMNAILKSKLREY------------------ARNLRVLMEKNPTDEE 301
             :.:|.|.:. |:.|........|||:.:.|                  .:.|..|..||..|:.
 Frog   106 -IAQKLFRDGHFNPEVVKYRQLCLKSQYKRYLTSQQQYFHKLLKQILASRKELLDLARKNGPDQV 169

  Fly   302 IACKIQEQMAEIYKVVGICLGIPSETFTWEYYDKSKNYQSIGPVSSLEFYERYVKPHFNVEDKVC 366
            :.           |........|.|..|                   ....||:|....|:|: |
 Frog   170 LK-----------KKPSSLRNTPEERET-------------------RAQCRYLKILREVKDE-C 203

  Fly   367 ----LVTDPRPTSSYDQAYTVDCLGNVVGGRPVLYNNQSVELLLAVV----TKSLKAGEAVWFGC 423
                |.::....||:.......|              .||.:.|.|:    |:.:|.        
 Frog   204 GDGTLSSEEEDLSSWLPESPTHC--------------PSVAVPLRVIPTLSTQDMKT-------- 246

  Fly   424 EVSKRFASKQGIEDVDVHDFKLVFDIDIQTTFSKADR--LIYGESAMTHAMVFTAVSVDKSG--- 483
                  |.||...:   ||.||:.....:....::|.  ||....:|...|  |.|:..:.|   
 Frog   247 ------ADKQEFTN---HDLKLLLRRHREKRKRQSDHPDLITDNLSMNDIM--TRVNAGRKGSLA 300

  Fly   484 -----VAQKLRVENSWGEDRGEKGYLVMNADWFREFGFEVVVDKKYVPEDVLRVFDMDPIVLPAW 543
                 ...|.||:..  :|:.:|....:..:         |.|...:|::.    |:.|.|||..
 Frog   301 ALFDLATMKKRVKEK--DDKKKKKLKTIKTE---------VEDYPDMPDEA----DIMPAVLPPE 350

  Fly   544 DPMGTL 549
            .|..||
 Frog   351 TPQVTL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1440NP_001285018.1 Peptidase_C1_2 102..547 CDD:281100 73/392 (19%)
nfrkbNP_989207.1 NFRKB_winged 380..477 CDD:291154
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 670..693
PHA03255 700..>840 CDD:165513
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 705..738
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1000..1033
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1234..1265
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165177306
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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