DRSC/TRiP Functional Genomics Resources

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Protein Alignment Miga and MIGA1

DIOPT Version :9

Sequence 1:NP_001162702.1 Gene:Miga / 31775 FlyBaseID:FBgn0030037 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001257313.1 Gene:MIGA1 / 374986 HGNCID:24741 Length:633 Species:Homo sapiens


Alignment Length:580 Identity:182/580 - (31%)
Similarity:282/580 - (48%) Gaps:117/580 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MPASWSSGGSLLPFRVSTTTKVVLFSLTAGVALMSVL---SRFLRRR-------KPPRPPRRARK 59
            :|.:|..  ||...:.|...| .||.:|| |:.:||:   ..|.|:|       .|..|.....:
Human    55 LPLTWYY--SLSQIKFSPVAK-KLFVVTA-VSAISVIFLAHHFKRKRGKKKGKILPWEPEHLILE 115

  Fly    60 YTGRRNRNSMRSPNDLISIAGSKASARSGSPVGSTLAYSDR---------------LSMASGSIG 109
            ||.|              .|..|.|:.|.|....||:.|..               .|..||| .
Human   116 YTKR--------------AASDKGSSCSSSRQNLTLSLSSTKDKGSQVCNYANGGLFSKYSGS-A 165

  Fly   110 VGVLGVQNAGPGSSV--------------------VTQLTAQQLGMMGMEALDTVINFWEDAL-- 152
            ..:..||:.....|.                    :...|.:.|.:||||..:..:..||.||  
Human   166 QSLASVQSVNSCHSCACGNSNSWDKADEDDIKLVNIPVTTPENLYLMGMELFEEALRRWEQALTF 230

  Fly   153 ----AAHYSPGG--LPALLTTAED-------SEFCREIQNLLEMAYTLQEQSELLFLDQRSVLFR 204
                |...:.|.  |.|....||:       :||..:::.||:.||.|||:            |.
Human   231 RNRQAEDEACGSIKLGAGDAIAEENVDDIISTEFIHKLEALLQRAYRLQEE------------FE 283

  Fly   205 EEHSIDEAEEEAGEADDDRRSRKSGSV--------LSRAGSDPNFDSAESFASALDQVADLREFD 261
            ......:....|.:.|.|......|:|        ||.|.:|       |||||. ::|:.||  
Human   284 ATLGASDPNSLADDIDKDTDITMKGNVEDFGLRDTLSIASTD-------SFASAA-ELAEHRE-- 338

  Fly   262 GFIETSYE-----EYPLFQSALKHHDEYTVPCRTIRAELMHCSTDTEYLAKLHCVRLAFQFLFKD 321
              :..:|.     ..|.::.|:...:|..:..|.:|.|::.|..|:::||||||:|.|||.:..:
Human   339 --VRHTYSLESLCHCPFYEEAMHLVEEGKIYSRVLRTEMLECLGDSDFLAKLHCIRQAFQVILSE 401

  Fly   322 PAVGQWICDAGRQILTDLLCLGDKDTKEFLVGYEDMVNYLHDSNNWPCIQMELEQRNVKAMTFYD 386
            .|...::.::||:||:.|:....|:.|:|...:::|:.:|..:::|...:|||..|.||.:.|||
Human   402 SANRIFLAESGRKILSALIVKARKNPKKFEDVFDEMIYFLEQTDHWGSTEMELAARGVKNLNFYD 466

  Fly   387 ICLDFIILDSFKDLDAPPASVTAVVQNRWLSNGFKETALTTAVWSVLKAKKRMLK-FPNGFMSHF 450
            :.||||::|||:||:.||.|:..||.||||::.|||||:.::.|||||.|::.:| .|:||.:||
Human   467 VVLDFILMDSFEDLENPPTSIQNVVNNRWLNSSFKETAVASSCWSVLKQKRQQMKQIPDGFFAHF 531

  Fly   451 YVISEQISPLMAWGFFGPNENLRDICHYFREELLAFLGDIFSFQKSRFTTIEEFSQDVLQ 510
            |.|.|.|||::||||.||..:|.|:|.:|:.::|.||.|||.|:|.|:::.|..::|::|
Human   532 YAICEHISPVLAWGFLGPRNSLYDLCCFFKNQVLLFLKDIFDFEKVRYSSTETLAEDLMQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MigaNP_001162702.1 DUF2217 13..523 CDD:287267 180/572 (31%)
MIGA1NP_001257313.1 DUF2217 59..604 CDD:287267 181/576 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147936
Domainoid 1 1.000 277 1.000 Domainoid score I1735
eggNOG 1 0.900 - - E1_KOG3831
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2943
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D172440at33208
OrthoFinder 1 1.000 - - FOG0003203
OrthoInspector 1 1.000 - - otm42260
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21508
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3839
SonicParanoid 1 1.000 - - X2608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.890

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