DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Trf2 and TBP1

DIOPT Version :9

Sequence 1:	NP_001096905.1	Gene:	Trf2 / 31773	FlyBaseID:	FBgn0261793	Length:	1715	Species:	Drosophila melanogaster
Sequence 2:	NP_187953.1	Gene:	TBP1 / 820546	AraportID:	AT3G13445	Length:	200	Species:	Arabidopsis thaliana

Alignment Length:	202	Identity:	82/202 - (40%)
Similarity:	127/202 - (62%)	Gaps:	15/202 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly  1262 ESSNNAKPIDLHQPIADNEHELDIV--INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTM 1323
            |.||   |:||      ::|...||  :.|:|.:.::.|.|.|:.||||..|.||. :....|.|
plant     7 EGSN---PVDL------SKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIM 62

  Fly  1324 KLRHPYTTASIWSSGRITCTGATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWA 1388
            ::|.|.|||.|::||::.||||.||..:|:|||:|||.:.|||||.:|.:|:|.|::|:|.:.:.
plant    63 RIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFP 127

  Fly  1389 IKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYP 1452
            |::...:..|...:||||||.||:.|:|:  .||..|.||.:|.:.:|.|.: :....|.::|||
plant   128 IRLEGLAYSHAAFSSYEPELFPGLIYRMK--VPKIVLLIFVSGKIVITGAKMRDETYKAFENIYP 190

  Fly  1453 LVFDFRK 1459
            ::.:|||
plant   191 VLSEFRK 197

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Trf2	NP_001096905.1	GBP_C	<967..1068	CDD:303769
		coiled coil	1037..1048	CDD:293879
		coiled coil	1057..1068	CDD:293879
		TLF	1283..1456	CDD:239953	72/176 (41%)
		PLN00062	1285..1459	CDD:177693	73/177 (41%)
TBP1	NP_187953.1	PLN00062	22..200	CDD:177693	74/178 (42%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2101
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1219067at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	4	3.780