Sequence 1: | NP_001096905.1 | Gene: | Trf2 / 31773 | FlyBaseID: | FBgn0261793 | Length: | 1715 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476939.1 | Gene: | Trf / 34102 | FlyBaseID: | FBgn0010287 | Length: | 224 | Species: | Drosophila melanogaster |
Alignment Length: | 228 | Identity: | 77/228 - (33%) |
---|---|---|---|
Similarity: | 128/228 - (56%) | Gaps: | 13/228 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 1240 MQSITVIDDDDEEKKEVAEDEEESSNNAKPIDLHQPIA-----DNEHELDIVINNVVCSFSVGCH 1299
Fly 1300 LKLREIALQGSNVEY--RRENGMVTMKLRHPYTTASIWSSGRITCTGATSESMAKVAARRYARCL 1362
Fly 1363 GKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKI 1427
Fly 1428 FSTGSVTVTAA-SVNHVESAIQHIYPLVFDFRK 1459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trf2 | NP_001096905.1 | GBP_C | <967..1068 | CDD:303769 | |
coiled coil | 1037..1048 | CDD:293879 | |||
coiled coil | 1057..1068 | CDD:293879 | |||
TLF | 1283..1456 | CDD:239953 | 62/175 (35%) | ||
PLN00062 | 1285..1459 | CDD:177693 | 63/176 (36%) | ||
Trf | NP_476939.1 | PLN00062 | 49..224 | CDD:177693 | 65/178 (37%) |
TBP_eukaryotes | 50..221 | CDD:239952 | 61/173 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2101 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1219067at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10126 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |