Sequence 1: | NP_001096905.1 | Gene: | Trf2 / 31773 | FlyBaseID: | FBgn0261793 | Length: | 1715 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_594566.1 | Gene: | tbp1 / 2541582 | PomBaseID: | SPAC29E6.08 | Length: | 231 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 249 | Identity: | 84/249 - (33%) |
---|---|---|---|
Similarity: | 136/249 - (54%) | Gaps: | 29/249 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1217 LPTVASNGNGLITAKMDLLEEEVMQSIT--VIDDDDEEKKEVAEDEEESSNNAKPIDLHQPIADN 1279
Fly 1280 EHELDIV--INNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSGRIT 1341
Fly 1342 CTGATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYEP 1406
Fly 1407 ELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASV-NHVESAIQHIYPLVFDFRK 1459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trf2 | NP_001096905.1 | GBP_C | <967..1068 | CDD:303769 | |
coiled coil | 1037..1048 | CDD:293879 | |||
coiled coil | 1057..1068 | CDD:293879 | |||
TLF | 1283..1456 | CDD:239953 | 66/176 (38%) | ||
PLN00062 | 1285..1459 | CDD:177693 | 67/177 (38%) | ||
tbp1 | NP_594566.1 | PLN00062 | 55..230 | CDD:177693 | 66/176 (38%) |
TBP_eukaryotes | 55..228 | CDD:239952 | 65/174 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2101 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.860 |