Sequence 1: | NP_001096905.1 | Gene: | Trf2 / 31773 | FlyBaseID: | FBgn0261793 | Length: | 1715 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001370645.1 | Gene: | tbp-1 / 176054 | WormBaseID: | WBGene00006542 | Length: | 340 | Species: | Caenorhabditis elegans |
Alignment Length: | 382 | Identity: | 107/382 - (28%) |
---|---|---|---|
Similarity: | 180/382 - (47%) | Gaps: | 61/382 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1092 PVANLNGGLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMAGVASTGRMSGQV 1156
Fly 1157 VGGSSGTASTAGTVRYFSQFSKMQTAGGPSLQRKLANGDTIVLATGSKNMFLTSSENKANLPTVA 1221
Fly 1222 SNGNGLITAKMDLLEEEV-MQSITV--------IDDDDEEKKEVAEDEEESSNNAKPIDLHQPIA 1277
Fly 1278 DNEHELDI---VINNVVCSFSVGCHLKLREIALQGSNVEYR-RENGMVTMKLRHPYTTASIWSSG 1338
Fly 1339 RITCTGATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENAS 1403
Fly 1404 YEPELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASVNH-VESAIQHIYPLVFDFRK 1459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trf2 | NP_001096905.1 | GBP_C | <967..1068 | CDD:303769 | |
coiled coil | 1037..1048 | CDD:293879 | |||
coiled coil | 1057..1068 | CDD:293879 | |||
TLF | 1283..1456 | CDD:239953 | 69/177 (39%) | ||
PLN00062 | 1285..1459 | CDD:177693 | 68/178 (38%) | ||
tbp-1 | NP_001370645.1 | TBP_eukaryotes | 165..338 | CDD:239952 | 66/174 (38%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2101 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1219067at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |