DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-T and pigt

DIOPT Version :10

Sequence 1:NP_572475.1 Gene:PIG-T / 31772 FlyBaseID:FBgn0030035 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001017115.1 Gene:pigt / 549869 XenbaseID:XB-GENE-1014749 Length:579 Species:Xenopus tropicalis


Alignment Length:576 Identity:225/576 - (39%)
Similarity:327/576 - (56%) Gaps:38/576 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTRWHYG-EKDNLYHTQLTPRVIAELLQQFA 77
            |.:|.        |.|||::.||....:...|||.||.... .|:.:.|.::.|:|:.:|:.:::
 Frog    24 PGSDV--------FREELLLTPLRSGDIAATFQFRTRLDADLRKEKVSHYRIFPKVLGQLISKYS 80

  Fly    78 VKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNRDVDRQWKELANVFSGVLCASLN 142
            ::|||:..|||.||.:.||.|:::|.:|||:|.||.. ::|  ||::.||||:|:.||:.|||||
 Frog    81 IQELHLSFTQGFWRTKAWGPPLLQAPTGAELWVWFQD-SVT--DVNKSWKELSNILSGIFCASLN 142

  Fly   143 FVDNTNSIAPRHLIRPQFMPAN--GQRFVRYATLPREIVCTENLTPWKKLLPCGSASGFASLLNS 205
            |:|:||::.|....:|..: ||  ....:||||||||||||||||||||||||||.:|.||||.:
 Frog   143 FIDSTNTVTPTASFKPLGV-ANITDHHLLRYATLPREIVCTENLTPWKKLLPCGSKAGLASLLRA 206

  Fly   206 GHVHNTKYHSLGLKVRVLCEDHDEDNCIVELTQTANLVYDLRLFELSNNDFSLRRLFGMGLNGYC 270
            ..::::.|||..:.:|.:|::.|..:...||.|...:|:|:........|:|:.::|...:...|
 Frog   207 ERLYHSSYHSQSVHIRPICQNADCSSVSWELRQALTVVFDMYSSGQGKRDWSIFKMFSRTVTESC 271

  Fly   271 ELAESSKIYVQRNELGER---YQLVPEPVHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNVA-- 330
            .||..|||||..:..|:.   ::|.|....|.:....|...||:.||:.:|...:..|..|||  
 Frog   272 PLASQSKIYVDVSGSGKEVDLFELNPPTSLERQVVVHGDRRVYAEYDLSQQGTFSTSRNLNVALK 336

  Fly   331 WLAPKSANRRRNLAKPSLPPVTVHRYLLGHGQERGRIVTEVTNSH-YDALPIMLQEVIPWYVHAY 394
            |    ......:..:|..|.....||:.|:|.:.|.|.|.|.|:| |.|.|:||.|.:|||:..|
 Frog   337 W----KGRTAESAGQPQSPLFHAERYVSGYGLQSGVINTMVFNNHPYRAYPVMLLETVPWYLRLY 397

  Fly   395 LHTLSIRRKPQRVNEYGGQRLTFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISIDVDYLLLKW 459
            :|||:|..:        |:......:||.|.|.|:.|..||:...||..:...|||..:..||||
 Frog   398 VHTLTITTR--------GKENKPSYIHYEPAKDRQRPHLLEMLIQLPPNSITKISIQFERALLKW 454

  Fly   460 LEYPPDANHGHYIGSAIVSSQLPMGRNY-TALPPEGHLFEHSF-NATRPSYVLSLHTEALIVSLP 522
            .|||||.|||.||..:::|..:|...|. |....|..||...| ::...||.:.|:||.|:|:||
 Frog   455 TEYPPDPNHGFYISPSVLSVLIPSVINQKTDELEESTLFSTLFPSSDGSSYFMRLYTEPLLVNLP 519

  Fly   523 TPDFSMPYNVICLACTVVALAFGPIHSVATKMIIVGRQTSAPKNFVKKIFNQLFRR 578
            |||||||||||||.|||||:.:|..:::.|:...|..:...  ...|.|.| |.||
 Frog   520 TPDFSMPYNVICLTCTVVAVGYGSFYNLLTRTFQVEDRKGG--GLAKTIAN-LIRR 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-TNP_572475.1 Gpi16 6..553 CDD:461180 217/549 (40%)
pigtNP_001017115.1 Gpi16 29..564 CDD:461180 217/552 (39%)

Return to query results.
Submit another query.