DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-T and pigt-1

DIOPT Version :9

Sequence 1:NP_572475.1 Gene:PIG-T / 31772 FlyBaseID:FBgn0030035 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001023812.1 Gene:pigt-1 / 179519 WormBaseID:WBGene00008918 Length:531 Species:Caenorhabditis elegans


Alignment Length:536 Identity:150/536 - (27%)
Similarity:242/536 - (45%) Gaps:89/536 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ERFHEELVVRPLSGDHVNTYFQFTTRWHYGEKDNLYHTQLTPRVIAELLQQFAVKELHIGLTQGL 89
            |.|.|:|.:.|:|.:.:...|:|.:...:..|.........||:|.|||.:::|::|.:.:..|.
 Worm    21 ENFDEKLTLSPVSKNELRVDFRFNSEREFNRKTESGDYLTFPRIIQELLSRYSVRKLTVTMAHGR 85

  Fly    90 WRYETWGYPIVEAT-SGAEMWAWFSGANLTNRDVDRQWKELANVFSGVLCASLNFVDNTNSIAPR 153
            |....||.|...:: :||:::|.|....  ..|.|.:.|.|....:||||.|::.::...|    
 Worm    86 WNLIGWGLPPQPSSPTGAQVFAEFEADQ--QEDADERMKFLVEALNGVLCTSISHINVITS---- 144

  Fly   154 HLIRPQFMPA---NGQRFV--RYATLPREIVCTENLTPWKKLLPCGSASGFASLLNSGHVHNTKY 213
                |:|:..   .|:..|  ||..|..|..||||||..:|||.| ..:|.::||:...::|:.|
 Worm   145 ----PEFIVLKNHGGETSVHKRYGVLSGETTCTENLTRLRKLLAC-KENGISTLLHPSKLYNSVY 204

  Fly   214 HSLGLKVRVLCEDHDEDNCIVELTQTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKI 278
            ||..|.|...|   |:|.|..::....::|. ....:.:...:||..:|...|...|::|.||||
 Worm   205 HSSHLVVEQQC---DKDQCNSKMEVGVSVVM-RNPSQKTQRHWSLADVFERKLGSQCKVARSSKI 265

  Fly   279 YVQRNELGERYQLVPEPVHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNV-AWLAPKSANRRRN 342
            :|    :|...::....|..:.|..|...     ::::....:...:...| ||.:..       
 Worm   266 HV----IGTTGEITTTDVKNLTTINGEEP-----FELYIPITDISMKQSVVKAWSSQG------- 314

  Fly   343 LAKPSLPPVTVHRYLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSIRRKPQRV 407
                            |..|:.|.:...:||.. .|..|.:.::||:|||     |...:...:.
 Worm   315 ----------------GFEQKHGVLTVHITNDE-SASEIHVSQIIPYYVH-----LRYSKINWKC 357

  Fly   408 NEYGGQRLTFKLLHYTPGKQRELPSHLEIGFML-PGQTSALISIDVDYLLLKWLEYPPDANHGHY 471
            ::.|..|:. |:  :...|..|.|:.|:....| .|||..| :|..|..||:..:||||||||.:
 Worm   358 DKNGVPRIE-KI--FKNSKSLEAPTLLQYKMKLSAGQTCEL-TIPFDKQLLRLEQYPPDANHGMH 418

  Fly   472 IGSAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICLA 536
            |.:|.|..|                        :.:...::|:.|::|.||.||||||:||||..
 Worm   419 IPAASVYIQ------------------------KSTSTYTIHSNAILVLLPVPDFSMPFNVICFV 459

  Fly   537 CTVVALAFGPIHSVAT 552
            .|..||.||||...:|
 Worm   460 ATAFALVFGPIQLYST 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-TNP_572475.1 Gpi16 27..553 CDD:282031 149/534 (28%)
pigt-1NP_001023812.1 Gpi16 18..468 CDD:282031 145/527 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166020
Domainoid 1 1.000 173 1.000 Domainoid score I2216
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 174 1.000 Inparanoid score I2715
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55326
OrthoDB 1 1.010 - - D143619at33208
OrthoFinder 1 1.000 - - FOG0003522
OrthoInspector 1 1.000 - - oto19546
orthoMCL 1 0.900 - - OOG6_103068
Panther 1 1.100 - - LDO PTHR12959
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R513
SonicParanoid 1 1.000 - - X2402
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.