DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10555 and ss18l2

DIOPT Version :10

Sequence 1:NP_572474.2 Gene:CG10555 / 31771 FlyBaseID:FBgn0030034 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001153293.1 Gene:ss18l2 / 550446 ZFINID:ZDB-GENE-050417-268 Length:82 Species:Danio rerio


Alignment Length:71 Identity:30/71 - (42%)
Similarity:42/71 - (59%) Gaps:5/71 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 QVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLADPAMNISQILPPPH 206
            |:|...||::||||..|::.|.::|..|:|.||:.|...||||:|||..:||.:..|.     |.
Zfish    15 QINQETIQRLLDENDQLVRCISEYQQKGRATECVQYQQILHRNIVYLGTIADASTEIQ-----PE 74

  Fly   207 ILQTQA 212
            ..||.|
Zfish    75 DTQTSA 80

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10555NP_572474.2 SSXT 141..200 CDD:428268 26/57 (46%)
ss18l2NP_001153293.1 SSXT 14..73 CDD:428268 26/62 (42%)

Return to query results.
Submit another query.