DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10555 and ss18l2

DIOPT Version :9

Sequence 1:NP_001285016.1 Gene:CG10555 / 31771 FlyBaseID:FBgn0030034 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001017009.1 Gene:ss18l2 / 549763 XenbaseID:XB-GENE-5815423 Length:81 Species:Xenopus tropicalis


Alignment Length:61 Identity:27/61 - (44%)
Similarity:39/61 - (63%) Gaps:6/61 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 VPQ------QVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLAD 193
            ||:      ||....:|::|:||..||:.|.::|:.|:|.||..|...|||||:|||.:||
 Frog     6 VPERLRGRGQVGEDTVQRLLEENDQLIRCIVEYQNKGRATECSQYQQILHRNLIYLASIAD 66

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10555NP_001285016.1 SSXT 141..200 CDD:282835 25/59 (42%)
ss18l2NP_001017009.1 SSXT 14..71 CDD:398622 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9773
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442230at2759
OrthoFinder 1 1.000 - - FOG0001535
OrthoInspector 1 1.000 - - otm47479
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4299
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.040

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