Protein Alignment CG10555 and ss18

DIOPT Version :10

• Sequence 1: NP_572474.2
• Gene: CG10555 / 31771
• FlyBaseID: FBgn0030034
• Length: 926
• Species: Drosophila melanogaster
• Sequence 2: NP_956038.1
• Gene: ss18 / 326668
• ZFINID: ZDB-GENE-030131-4867
• Length: 368
• Species: Danio rerio
• Alignment Length: 460
• Identity: 149/460 - (32%)
• Similarity: 169/460 - (36%)
• Gaps: 130/460 - (28%)

  Fly   143 VNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLADPAMNISQILPPPHI 207
            :..|.|||:||||..|||.|.||||.||..||..|...|||||||||.:||...|:..:||.|.
Zfish    16 ITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVYLATIADSNQNMQSLLPAPP- 79

  Fly   208 LQTQAMQQGGQQTPPTGPHGMLGGPPQQQQQPGQGPVPGQPGQGPPQMGMQQHGGDPQGPPVQMP 272
            .|...|.|.|  ..|..|||        ...|.:||.       .|.|..|.:|
Zfish    80 TQNMPMNQSG--ATPQLPHG--------HSMPSEGPT-------APHMQSQMNG----------- 116

  Fly   273 PYGAQQQPQP-HPGLP-PGAQQQSQQQQQQQQQQQQQQQQQQQQQQAAAAAAAAAAAAAVAAGQQ 335
                 |.|.| |..:. ||..|.|                                  ::.:|..
Zfish   117 -----QMPGPNHMSMQGPGPNQSS----------------------------------SIPSGSM 142

  Fly   336 QGPQVSQAGPQQQQQQQHPVYRNAQGQGQPGAGQVPGQGQGPVQSVINPNAAPN-QQRPNNGPLS 399
            ..|. |..|.........|..:..|.|||....|  ||..|      |....|| ..:||.||:.
Zfish   143 NIPP-SSHGSMGAYNHAVPSSQGIQSQGQMNINQ--GQPMG------NYGPRPNMNMQPNQGPMM 198

  Fly   400 GPQNPQQQQQQPQPG--GQQPPNQQQQQQQTGPG----GPGPQPGAGGPGVPPPQSP---YRVSY 455
            ..|.|.||...|..|  ||....||......|.|    |..|.|    |..||.|.|   |....
Zfish   199 HQQAPSQQYNMPPSGGSGQHYQGQQNPMGMMGQGNHVMGQRPMP----PYRPPHQGPPQQYPGQD 259

  Fly   456 QQQQQQHSHYPGYPPQPQTQY-QPQGAYPYGPP-TQGYGPPPPGPPNAAQGGYHHGPAGAATGAS 518
            :...:|:||.....|:..||| |.|.||..||| .|||   ||....:.|.||         ...
Zfish   260 EYYTEQYSHGGQGAPEGNTQYGQQQEAYQQGPPQQQGY---PPQQQYSGQQGY---------PGQ 312

  Fly   519 GHGYQPNAGAGQGPPPGAYPPPPGSQQVPPVPGQQ-----QPPPGPPPPGQPPTGGQQQPPPGPP 578
            ..||.|:.||     |..||..|.||      |||     .|.||||.       ||.|.|....
Zfish   313 QQGYGPSQGA-----PSQYPNYPQSQ------GQQYSAYRAPQPGPPQ-------GQPQRPYAFD 359

  Fly   579 QSQYG 583
            |.|||
Zfish   360 QGQYG 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG10555	NP_572474.2	SSXT	141..200	CDD:428268	33/56 (59%)
ss18	NP_956038.1	SSXT	16..73	CDD:428268	33/56 (59%)
		PABP-1234	<52..212	CDD:130689	63/236 (27%)
		PABP-1234	<170..285	CDD:130689	41/126 (33%)