DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10555 and Ss18l1

DIOPT Version :9

Sequence 1:NP_001285016.1 Gene:CG10555 / 31771 FlyBaseID:FBgn0030034 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_848865.4 Gene:Ss18l1 / 269397 MGIID:2444061 Length:402 Species:Mus musculus


Alignment Length:517 Identity:144/517 - (27%)
Similarity:168/517 - (32%) Gaps:159/517 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ANMQGGGGGGVPQQVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLAD 193
            |:.:..|.|.|.||.    ||||||||..|||.|.|:||.||..||..|...|||||||||.:||
Mouse     6 ASARPRGKGEVTQQT----IQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIAD 66

  Fly   194 PAMNISQILPPPHILQTQAMQQGGQQTPPTGPHGMLGGPPQQQQQPGQGPVPGQPGQGPPQMGMQ 258
            ...|:..:||.|   .||.|..|                            ||...|.....|:.
Mouse    67 SNQNMQSLLPAP---PTQNMNLG----------------------------PGALSQSGSSQGLH 100

  Fly   259 QHGGDPQGPPVQMPPYGAQQQPQPHPGLPPGAQQQSQQQQQQQQQQQQQQQQQQQQQQAAAAAAA 323
                 |||          ........||||.:..|.         |..........||.|.:...
Mouse   101 -----PQG----------SLSDTVSTGLPPASLMQG---------QIGNGPNHVSMQQTAQSTLP 141

  Fly   324 AAAAAAVAAGQQQGPQVSQAGPQQQQQQQHPVYRNAQGQGQPGAGQVPGQGQGPVQSVINPNAAP 388
            ..:.:...:|...||..|.:||..|                    .||.||||.:.:.::     
Mouse   142 TTSMSLSGSGHGTGPGYSHSGPTSQ--------------------SVPMQGQGAISNYVS----- 181

  Fly   389 NQQRPNNGPLSGPQNPQQQQ-----QQPQPGGQQPPNQQQQQQQTGPGGPGPQPGAGGPGVPPPQ 448
               |.|....|.|.:...||     .....||.|....|......|.||.|     |......|.
Mouse   182 ---RTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQG-----GSMMGQRPM 238

  Fly   449 SPYRVSYQQQQQ-----------QHSHYPGYPPQPQTQYQPQG----AY------------PYGP 486
            :|||.|.|...|           |:||..|.......||.|.|    ||            .:..
Mouse   239 APYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRSFED 303

  Fly   487 PTQGYGPPPPGPPNAAQGGYHHGPAGAATGASGHGYQPNAGAGQGPPPGAYPPPPGSQQVPPVPG 551
            |||.|........:..|.||..|.|...|.:...                ||    :||  ..||
Mouse   304 PTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQ----------------YP----NQQ--SYPG 346

  Fly   552 QQQ---PPPGPPPPGQPPTGGQQQPPPGPPQSQYGPPPPQNSAGGPPPMGYAGYPPNPGQYG 610
            |||   |..|.|........||.|.......||.||     ||....|.||     ..||||
Mouse   347 QQQGYGPAQGAPSQYSSYQQGQGQQYGSYRTSQTGP-----SAQQQRPYGY-----EQGQYG 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10555NP_001285016.1 SSXT 141..200 CDD:282835 34/58 (59%)
Ss18l1NP_848865.4 N-terminal auto-inhibitory domain, necessary for interaction with SMARCA4/BRG1. /evidence=ECO:0000250 1..148 61/200 (31%)
SSXT 14..73 CDD:309945 36/62 (58%)
SH2-binding. /evidence=ECO:0000255 50..53 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..171 32/173 (18%)
Methionine-rich intra-molecular domain. /evidence=ECO:0000250 149..238 28/121 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..402 60/215 (28%)
MFD domain. /evidence=ECO:0000250 252..323 15/70 (21%)
Necessary for nuclear localization. /evidence=ECO:0000250 340..402 26/71 (37%)
SH2-binding. /evidence=ECO:0000255 359..362 0/2 (0%)
SH3-binding. /evidence=ECO:0000255 377..385 5/12 (42%)
Necessary for interaction with CREBBP and for the recruitment of CREBBP to the nuclear bodies. /evidence=ECO:0000250 393..402 4/6 (67%)
SH2-binding. /evidence=ECO:0000255 397..400 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9880
eggNOG 1 0.900 - - E1_KOG3227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001535
OrthoInspector 1 1.000 - - otm42369
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23107
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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