DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10555 and Ss18

DIOPT Version :9

Sequence 1:NP_001285016.1 Gene:CG10555 / 31771 FlyBaseID:FBgn0030034 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_033306.2 Gene:Ss18 / 268996 MGIID:107708 Length:418 Species:Mus musculus


Alignment Length:544 Identity:180/544 - (33%)
Similarity:203/544 - (37%) Gaps:166/544 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ANMQGGGGGGVPQQVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLAD 193
            |..|.|.|     ::..|.||||||||..|||.|.|:|:.|||.||..|...||.||||||.:||
Mouse     7 APRQRGKG-----EITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIAD 66

  Fly   194 PAMNISQILPPPHILQTQAMQQGGQQTPPTGPHGMLGG----PPQQQQQPGQGPVPGQPGQGPPQ 254
            ...|:..:||.|           ..||.|.||.||...    ||:....|..|.|    |.|||.
Mouse    67 SNQNMQSLLPAP-----------PTQTMPMGPGGMSQSGPPPPPRSHNMPSDGMV----GGGPPA 116

  Fly   255 MGMQ-QHGGDPQGPPVQMPPYGAQQQPQPHPGLPPGAQQQSQQQQQQQQQQQQQQQQQQQQQQAA 318
            ..|| |..|...||. .||..|            ||..|.|........                
Mouse   117 PHMQNQMNGQMPGPN-HMPMQG------------PGPSQLSMTNSSMNM---------------- 152

  Fly   319 AAAAAAAAAAAVAAGQQQGPQVSQAGPQQQQQQQHPVYRNAQGQGQPGAGQVPGQGQGPVQSVIN 383
                 .:::.....|.......||:.|.|.|.        ...||||.....|           .
Mouse   153 -----PSSSHGSMGGYNHSVPSSQSMPVQNQM--------TMSQGQPMGNYGP-----------R 193

  Fly   384 PNAAPNQQRPNNGPLSGPQNPQQQQQQPQPGGQQPPNQQQQQQQTGPGGPGPQPGAGG------- 441
            ||.  |.| ||.||:...|.|.||...| |||     .|..|.|..|.|...|...|.       
Mouse   194 PNM--NMQ-PNQGPMMHQQPPSQQYNMP-PGG-----AQHYQGQQAPMGLMGQVNQGSHMMGQRQ 249

  Fly   442 --PGVPPPQSPYRVSYQQQQ----QQHSHYPGYPPQPQT-QYQPQGAYPYG---P--PTQGYGPP 494
              |..||.|.|.: .|..|:    .|:||....||:... ||.|.|...||   |  |.|||..|
Mouse   250 MPPYRPPQQGPPQ-QYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRP 313

  Fly   495 PPGPPNAAQGGYHHGPAGAATGASGHGYQPNAGAGQGPPP-GAYPPPPGSQQVPPVPGQQQPPPG 558
               ..:::| .|:.|      |.|.:|.|.:  |.||||| ..|||            |||..||
Mouse   314 ---YEDSSQ-HYYEG------GNSQYGQQQD--AYQGPPPQQGYPP------------QQQQYPG 354

  Fly   559 PPPPGQPPTGGQQQPPPGPPQSQYGPPPPQNSAGGPPPMGYAGYPPNPG-QYGQAGAGGGPPPSG 622
                        ||..||..|| |||     |.|||.|. |..||...| |||           |
Mouse   355 ------------QQGYPGQQQS-YGP-----SQGGPGPQ-YPNYPQGQGQQYG-----------G 389

  Fly   623 YWP--PPPPTSSAQSPYQAYQQQQ 644
            |.|  |.||....|.|| .|.|.|
Mouse   390 YRPTQPGPPQPPQQRPY-GYDQGQ 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10555NP_001285016.1 SSXT 141..200 CDD:282835 32/58 (55%)
Ss18NP_033306.2 SSXT 14..73 CDD:282835 33/63 (52%)
SH2-binding. /evidence=ECO:0000255 50..53 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..120 17/57 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..418 101/285 (35%)
2 X 13 AA imperfect tandem repeats 344..369 17/54 (31%)
SH2-binding. /evidence=ECO:0000255 374..377 1/3 (33%)
SH3-binding. /evidence=ECO:0000255 392..401 4/8 (50%)
SH2-binding. /evidence=ECO:0000255 413..416 180/544 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9880
eggNOG 1 0.900 - - E1_KOG3227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442230at2759
OrthoFinder 1 1.000 - - FOG0001535
OrthoInspector 1 1.000 - - otm42369
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23107
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4299
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.950

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