DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10555 and ss18l1

DIOPT Version :9

Sequence 1:NP_001285016.1 Gene:CG10555 / 31771 FlyBaseID:FBgn0030034 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_001182635.1 Gene:ss18l1 / 100380069 XenbaseID:XB-GENE-993774 Length:402 Species:Xenopus tropicalis


Alignment Length:506 Identity:142/506 - (28%)
Similarity:172/506 - (33%) Gaps:164/506 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ANMQGGGGGGVPQQVNSAQIQKMLDENCGLIQTIQDFQSMGKAQECMSYHVALHRNLVYLAQLAD 193
            |:.:..|.|.:.||.    ||||||||..|||.|.|:||.||..||..|...|||||||||.:||
 Frog     6 ASARPRGKGEITQQT----IQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVYLATIAD 66

  Fly   194 PAMNISQILPPPHILQTQAMQQGGQQTPPTGP----HGM------LGG--PPQQQQQPGQGPVPG 246
            ...|:..:||.|   .||.|..|......|||    |..      ||.  ||....|       |
 Frog    67 SNQNMQSLLPAP---PTQNMNLGPGGMSQTGPSQTLHSQGNLSDALGSSLPPSSLMQ-------G 121

  Fly   247 QPGQGPPQMGMQQHG----------------GDPQGPPVQMPPYGAQQQPQPHPG---------- 285
            |...||..:.|||.|                |...|....:|  .:|..|....|          
 Frog   122 QISNGPNHVSMQQSGQTTLPTTTMSMAVSTHGTAPGYSHTVP--SSQNMPMQSQGSIGNYVSRAN 184

  Fly   286 --LPPGAQQQSQQQQQQQQQQQQQQQQQQQQQQAAAAAAAAAAAAAVAAGQQQ-GP-QVSQAGPQ 346
              :|........||.........|...|..|.|.:.:....::..:...||:. || :.||.|..
 Frog   185 MNMPSNPVSMMHQQATGSHYTSAQAGSQHYQGQPSISMMNQSSQGSGMIGQRPLGPYRPSQQGSS 249

  Fly   347 QQQQQQHPVYR----NAQGQGQPGAGQVPGQGQGPVQSVINPNAAPNQQRPNNGPLSGPQNPQQQ 407
            ||...|...|.    ::||..:|...|....|.|..          :.|:...|..|..:..:..
 Frog   250 QQYLGQEEYYSEQYGHSQGTSEPMTPQYYTDGHGDY----------SYQQSTYGEQSYDRTFEDS 304

  Fly   408 QQQPQPGGQQPPNQQQQQQQTGPGGPGPQPGAGGPGVPPPQSPYRVSYQQQ---QQQHSHYPGYP 469
            .|....||    |.|..||||     |.|.|:|               |||   |||:|:...||
 Frog   305 SQHYYEGG----NAQYSQQQT-----GYQQGSG---------------QQQAYSQQQYSNQQNYP 345

  Fly   470 PQPQTQYQPQGAYPYGPPTQGYGPPPPGPPNAAQGGYHHGPAGAATGASGH--GYQPNAGAGQGP 532
            .|                .|||.|                    |.|||..  |||    .|||.
 Frog   346 GQ----------------QQGYVP--------------------AQGASSQYSGYQ----QGQGQ 370

  Fly   533 PPGAYPPPPGSQQVPPVPGQQQPPPGPPPPGQPPTGGQQQPPPGPPQSQYG 583
            ...:|                       ...|..:..|||.|.|..|.|||
 Frog   371 QYTSY-----------------------RTSQTASTAQQQRPYGYEQGQYG 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10555NP_001285016.1 SSXT 141..200 CDD:282835 34/58 (59%)
ss18l1NP_001182635.1 SSXT 14..73 CDD:368251 35/62 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9773
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442230at2759
OrthoFinder 1 1.000 - - FOG0001535
OrthoInspector 1 1.000 - - otm47479
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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