| Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_004189.1 | Gene: | CHRNA6 / 8973 | HGNCID: | 15963 | Length: | 494 | Species: | Homo sapiens |
| Alignment Length: | 744 | Identity: | 238/744 - (31%) |
|---|---|---|---|
| Similarity: | 323/744 - (43%) | Gaps: | 287/744 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 27 KRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWEP 91
Fly 92 KEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEY 156
Fly 157 FPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLSEFYTSVEWDILEVPAVRNEKFY 221
Fly 222 TCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVF 286
Fly 287 FLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLVLNIHFRSPQTHTMAPWVRTVFINQLP 351
Fly 352 RFLVMRRPLYPISEMIKSSRRLMVRTCNGLELRDQIPPLPPPVALSRMHHSPKTTSRSTSPHLQH 416
Fly 417 RVQTYNLMDECGMGMGGGASTITGHLSSLYPPTMSTANQQTSTTSSLIDAQYHNQYQQTGGSLLD 481
Fly 482 HPLTPTKFRQMTSTSSQTGQNGSGNGNGNGGYGGHGQSGGHHLYRQQSSCSANFSPLPQHAHQAH 546
Fly 547 ASTTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSGTIQIHQGMGAGAACQSSELLHHQQLHH 611
Fly 612 QQMHHQQQQQQQQQHHHHQRPTTSAAAAAAAAAAGGPSTSAAAAAAAAAAAAGTPPPPPPPAGVC 676
Fly 677 DILPACQREGGPHCCSGRGNVRQRWHTCPELHKAMDGVTYIADQTRKEEESTRVKEDWKYVAMVL 741
Fly 742 DRLFLWIFTIAVVVGTAGIILQAPTLYDT 770 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 102/213 (48%) |
| Neur_chan_memb | 248..>359 | CDD:280999 | 76/110 (69%) | ||
| Neur_chan_memb | <683..760 | CDD:280999 | 26/76 (34%) | ||
| CHRNA6 | NP_004189.1 | Neur_chan_LBD | 34..484 | CDD:332142 | 233/734 (32%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 251 | 1.000 | Domainoid score | I2107 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H20888 | |
| Inparanoid | 1 | 1.050 | 485 | 1.000 | Inparanoid score | I1448 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000583 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm8639 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101158 | |
| Panther | 1 | 1.100 | - | - | O | PTHR18945 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X294 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 12 | 11.870 | |||||