Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009293684.1 | Gene: | htr3a / 571641 | ZFINID: | ZDB-GENE-071012-5 | Length: | 482 | Species: | Danio rerio |
Alignment Length: | 457 | Identity: | 127/457 - (27%) |
---|---|---|---|
Similarity: | 214/457 - (46%) | Gaps: | 69/457 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 ANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYK 86
Fly 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYT-----GRVEWRPPAIY 146
Fly 147 KSSCEIDVEYFPFDEQTCVMKFGSW--TYDGFQVDLRHIDELNGTNVVEVGVDLSEFYTSVEWDI 209
Fly 210 LEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVS 274
Fly 275 LSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLVLNIHFRSPQTHTMA 339
Fly 340 PWVRTVFINQLPRFLVMRRPLYPISEMIKSSRRLMVRTCNGLELRDQIPPLPPPVALSRMHHSPK 404
Fly 405 TTSRSTSPHLQHRVQTYNLMDEC------GMGMGGGASTITGHLSSLYPPTMSTANQQTSTTSSL 463
Fly 464 ID 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 67/221 (30%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 33/110 (30%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
htr3a | XP_009293684.1 | LIC | 21..479 | CDD:273305 | 127/457 (28%) |
Neur_chan_LBD | 40..246 | CDD:280998 | 67/219 (31%) | ||
Neur_chan_memb | 253..479 | CDD:280999 | 52/224 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |