Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065135.2 | Gene: | CHRNA10 / 57053 | HGNCID: | 13800 | Length: | 450 | Species: | Homo sapiens |
Alignment Length: | 403 | Identity: | 160/403 - (39%) |
---|---|---|---|
Similarity: | 228/403 - (56%) | Gaps: | 39/403 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 AKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLKWE 90
Fly 91 PKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVE 155
Fly 156 YFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLSEFYTSVEWDILEVPAVRNEKF 220
Fly 221 YTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTV 285
Fly 286 FFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLVLNIHFRSPQTHTMAPWVRTVFINQL 350
Fly 351 PRFLVMRRPLYPISEMIKSSRRLMVRTCNGLELRDQIPPLP--------PPVALSRMHHSPKTTS 407
Fly 408 RSTSPHLQHRVQT 420 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 92/214 (43%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 52/110 (47%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
CHRNA10 | NP_065135.2 | LIC | 31..442 | CDD:273305 | 159/402 (40%) |
Neur_chan_LBD | 32..235 | CDD:280998 | 90/211 (43%) | ||
Neur_chan_memb | 243..434 | CDD:280999 | 66/181 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 355..380 | 6/40 (15%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |