Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_696993.2 | Gene: | chrnb4 / 568566 | ZFINID: | ZDB-GENE-120809-1 | Length: | 525 | Species: | Danio rerio |
Alignment Length: | 759 | Identity: | 243/759 - (32%) |
---|---|---|---|
Similarity: | 333/759 - (43%) | Gaps: | 282/759 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 MILVLSFISSSTANPDAKRLYDDLLS--NYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIM 72
Fly 73 TTNLWVEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 137
Fly 138 VEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLSEFY 202
Fly 203 TSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPS 267
Fly 268 DSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLVLNIHFRS 332
Fly 333 PQTHTMAPWVRTVFINQLPRFLVMRRPL-YPISEMIKSSRRLMVRTCNGLELRDQIPPLPPPVAL 396
Fly 397 SRMHHSPKTTSRSTSPHLQHRVQTYNLMDECGMGMGGGASTITGHLSSLYPPTMSTANQQTSTTS 461
Fly 462 SLIDAQYHNQYQQTGGSLLDHP-LTPTKFRQMTSTSSQTGQNGSGNGNG-NGGYGGHGQSGGHHL 524
Fly 525 YRQQSSCSANFSPLPQHAHQAHASTTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSGTIQIH 589
Fly 590 QGMGAGAACQSSELLHHQQLHHQQMHHQQQQQQQQQHHHHQRPTTSAAAAAAAAAAGGPSTSAAA 654
Fly 655 AAAAAAAAAGTPPPPPPPAGVCDILPACQREGGPHCCSGRGNVRQRWHTCPELHKAMDGVTYIAD 719
Fly 720 QTRKEEESTRVKEDWKYVAMVLDRLFLWIFTIAVVVGTAGIILQ 763 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 100/216 (46%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 68/110 (62%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 32/76 (42%) | ||
chrnb4 | XP_696993.2 | LIC | 14..501 | CDD:273305 | 241/756 (32%) |
Neur_chan_LBD | 37..242 | CDD:280998 | 100/216 (46%) | ||
Neur_chan_memb | 249..500 | CDD:280999 | 132/515 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm6399 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |