Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524406.1 | Gene: | ort / 45910 | FlyBaseID: | FBgn0003011 | Length: | 485 | Species: | Drosophila melanogaster |
Alignment Length: | 504 | Identity: | 100/504 - (19%) |
---|---|---|---|
Similarity: | 176/504 - (34%) | Gaps: | 175/504 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 FQVTIDMILVLSF-------ISSSTANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQ 61
Fly 62 LIDVNLKNQIMTTNLWVEQSWYDYKLKWEPKEYGGVEMLHVP-SDHIWRPDIVLYNNADGNFEVT 125
Fly 126 LATKATLNYTGRVEWRPPAIYKS-------------SCEIDVEYFPFDEQTCVMKFGSWTYDGFQ 177
Fly 178 VDLRH-IDEL----NGTN--VVEVGVDLSEFYTSVEWDILEVPAVRNEKF----------YTCCD 225
Fly 226 EPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYL-PSDSGEKVSLSISILLSLTVFFLL 289
Fly 290 LAEIIPPTSLVVPLLGKFVLFTMILDTF-SICVTVLVLNIHFRSPQTHTMAPWVRTVFINQLPRF 353
Fly 354 LVMRRPLYPISEMIKSSRRLMVRTCNGLELRDQIPPLPPPVALSRMHHSPKTTSRSTSPHLQHRV 418
Fly 419 QTYNLMDECGMGMGGGASTITGHLSSLYPP--TMSTANQQTSTTSSLID 465 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 49/245 (20%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 21/112 (19%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
ort | NP_524406.1 | LIC | 31..481 | CDD:273305 | 94/476 (20%) |
Neur_chan_LBD | 38..235 | CDD:280998 | 46/235 (20%) | ||
Neur_chan_memb | 243..>334 | CDD:280999 | 26/148 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |