Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001303470.1 | Gene: | pHCl-2 / 43703 | FlyBaseID: | FBgn0039840 | Length: | 526 | Species: | Drosophila melanogaster |
Alignment Length: | 511 | Identity: | 107/511 - (20%) |
---|---|---|---|
Similarity: | 187/511 - (36%) | Gaps: | 115/511 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 TIDMILVLSFIS-SSTANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDV-NLKN 69
Fly 70 -------QIMTTNLWVEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNAD-GNFEVTL 126
Fly 127 ATKATLNY------------------TGRVE-----WRP---------------------PAIYK 147
Fly 148 SS-------------CEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLS 199
Fly 200 EFYTSVEWDIL-----EVPAVRNEKF--YTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISF 257
Fly 258 LTILVFYLPSD-SGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICV 321
Fly 322 TVLVLNIHFR-----SPQTHTMAPWVRTVFINQLPRFLVMRRPLY--PISEMIKSSRRLMVRTCN 379
Fly 380 GLELRDQIPPLPPPV-----------ALSRMHHSPKTTSRSTSPHLQHRVQTYNLM 424 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 61/287 (21%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 23/116 (20%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
pHCl-2 | NP_001303470.1 | LIC | 46..522 | CDD:273305 | 94/467 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447270 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |