Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
Alignment Length: | 379 | Identity: | 83/379 - (21%) |
---|---|---|---|
Similarity: | 142/379 - (37%) | Gaps: | 86/379 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 SFISSSTANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLWVE 79
Fly 80 QSWYDYKLKWEPKEYG---GVEMLHVPSDHIWRPDIVLYNNADGNFE-VTLATKATLNY-TGRVE 139
Fly 140 WRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLSEF--- 201
Fly 202 -----------Y--------------------TSVEWDILEVPAVRNE------------KFYTC 223
Fly 224 CD----------------------EPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLP 266
Fly 267 SD-SGEKVSLSISILLSLTVFFLLLAEIIP----PTSL--VVPLLGKFVLFTMI 313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 61/287 (21%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 20/73 (27%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 52/221 (24%) |
LIC | 111..670 | CDD:273305 | 81/366 (22%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 20/73 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447334 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |