Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775394.1 | Gene: | chrnb3b / 317643 | ZFINID: | ZDB-GENE-030102-4 | Length: | 462 | Species: | Danio rerio |
Alignment Length: | 427 | Identity: | 195/427 - (45%) |
---|---|---|---|
Similarity: | 263/427 - (61%) | Gaps: | 37/427 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 VTIDMILVLSFISSSTANPDAKR----------LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLS 60
Fly 61 QLIDVNLKNQIMTTNLWVEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVT 125
Fly 126 LATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTN 190
Fly 191 VVEVGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGI 255
Fly 256 SFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSIC 320
Fly 321 VTVLVLNIHFRSPQT-HTMAPWVRTVFINQLPRFLVMR----RPLYPISEMIKSSRRLMVRTCNG 380
Fly 381 LELRDQIPPLP--PPVALSRMHHSPKTTSRSTSPHLQ 415 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 99/224 (44%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 71/115 (62%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
chrnb3b | NP_775394.1 | LIC | 5..449 | CDD:273305 | 194/423 (46%) |
Neur_chan_LBD | 31..235 | CDD:280998 | 98/214 (46%) | ||
Neur_chan_memb | 242..446 | CDD:280999 | 88/175 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |