Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001241879.1 | Gene: | chrng / 100536659 | ZFINID: | ZDB-GENE-030131-3805 | Length: | 540 | Species: | Danio rerio |
Alignment Length: | 354 | Identity: | 146/354 - (41%) |
---|---|---|---|
Similarity: | 215/354 - (60%) | Gaps: | 13/354 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ILVLSFISSSTANPDAKRLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTN 75
Fly 76 LWVEQSWYDYKLKWEPKE----YGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTG 136
Fly 137 RVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHIDELNGTNVVEVGVDLSEF 201
Fly 202 YTSVEWDILEVPA--VRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVF 263
Fly 264 YLPSDS-GEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLVLN 327
Fly 328 IHFRSPQTHTMAPWVRTVFINQLPRFLVM 356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 88/221 (40%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 48/110 (44%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
chrng | NP_001241879.1 | LIC | 21..511 | CDD:273305 | 142/346 (41%) |
Neur_chan_LBD | 27..246 | CDD:280998 | 88/222 (40%) | ||
Neur_chan_memb | 253..509 | CDD:280999 | 48/110 (44%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |