Sequence 1: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031749826.1 | Gene: | chrna4 / 100135106 | XenbaseID: | XB-GENE-5994598 | Length: | 762 | Species: | Xenopus tropicalis |
Alignment Length: | 767 | Identity: | 283/767 - (36%) |
---|---|---|---|
Similarity: | 387/767 - (50%) | Gaps: | 175/767 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 MILVLSFISSSTANPDAK-----RLYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKN 69
Fly 70 QIMTTNLWVEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNY 134
Fly 135 TGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDL----RHIDELNGTNVVEVG 195
Fly 196 VDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTI 260
Fly 261 LVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVLV 325
Fly 326 LNIHFRSPQTHTMAPWVRTVFINQLPRFLVMRRPLYP-ISEMIKSSRRLMVRTCNGLELRDQIPP 389
Fly 390 LPPPVALSRMHHSPKTTSRSTSPHLQHRVQTYNLMDECGMGMGGGASTITGHLSSLYPPTMSTAN 454
Fly 455 QQTSTTSSLIDAQYHNQYQQTGGSLLDHPLTPTKFRQMTSTSSQTGQNGSGNGNGNGGYGGHGQS 519
Fly 520 GGHHLYRQQSSCSANFSPLPQHAHQAHASTTTSDLGMANPNVIKSTTTVNSVATASTLADSCCSG 584
Fly 585 TIQIHQGMGAGAACQSSELLHHQQLHHQQMHHQQQQQQQQQHHHHQRPTTSAAAAAAAAAAGGPS 649
Fly 650 TSAAAAAAAAAAAAGTPPPPPPPAGVCDILPACQREGGPHCCSGRGNVRQRWH----TCPELHKA 710
Fly 711 MDGVTYIADQTRKEEESTRVKEDWKYVAMVLDRLFLWIFTIAVVVGTAGIIL 762 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 115/223 (52%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 71/110 (65%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 35/80 (44%) | ||
chrna4 | XP_031749826.1 | LGIC_ECD | 170..376 | CDD:355788 | 115/218 (53%) |
Neur_chan_memb | 383..753 | CDD:397193 | 159/517 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 252 | 1.000 | Domainoid score | I2037 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 477 | 1.000 | Inparanoid score | I1443 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D188416at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9533 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X294 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |