DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1632 and Corin

DIOPT Version :9

Sequence 1:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:NP_058565.2 Gene:Corin / 53419 MGIID:1349451 Length:1113 Species:Mus musculus


Alignment Length:750 Identity:163/750 - (21%)
Similarity:258/750 - (34%) Gaps:250/750 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 RCSPLELSYCRQVGYNITTYPNLLGHASYEQ--LAEDVIVFRELVDGECHREAYDFVCRLLQPPC 446
            :|.|:.|..|..:.||.|.|||.|||.:.::  ::.:..:|..||...|::....|.|.:|.|.|
Mouse   522 QCEPITLELCMNLPYNHTHYPNYLGHRTQKEASISWESSLFPALVQTNCYKYLMFFACTILVPKC 586

  Fly   447 DTHGSDLQPTPGQIC---REYCESFMAGCGGRLPQRFRQFFDCERFPEST--------------- 493
            |.:.....|....:|   :|.|||.:...|.:.|:.    .||.:|||.:               
Mouse   587 DVNTGQRIPPCRLLCEHSKERCESVLGIVGLQWPED----TDCNQFPEESSDNQTCLLPNEDVEE 647

  Fly   494 ---------------GTQSCHQKPHCVSDMQSN------------------VQSPRLCDGYADCP 525
                           |::.|..:..|..|....                  ::...:|||:.|||
Mouse   648 CSPSHFKCRSGRCVLGSRRCDGQADCDDDSDEENCGCKERALWECPFNKQCLKHTLICDGFPDCP 712

  Fly   526 DLSDERSCAFCSPNALYCGRGRACVPRKARCDGKADCPDGADEKDCLSIAPLAADLLQPEPLVPY 590
            |..||::|:||..|.|.|. ...||||...|||..||.|.:||..|::::               
Mouse   713 DSMDEKNCSFCQDNELECA-NHECVPRDLWCDGWVDCSDSSDEWGCVTLS--------------- 761

  Fly   591 LSRFHSAGYAVFSEKGVVGKLCAEGLEGDAKLVVRQTVSESLCKSL------------GYESVEI 643
             ...:|:......:......:||:|.        |:|:|:..||.:            |.|..:.
Mouse   762 -KNGNSSSLLTVHKSAKEHHVCADGW--------RETLSQLACKQMGLGEPSVTKLIPGQEGQQW 817

  Fly   644 FDVQNDTERLNDYVRVLDPHAPEISFIRTHCPRRQVLYVGCGELRCGVQSALFNAKQHLSLPKMS 708
            ..:..:.|.||...      ..|:...|..||.|..:.:.|.:..||.:.|....|:.|. .:.|
Mouse   818 LRLYPNWENLNGST------LQELLVYRHSCPSRSEISLLCSKQDCGRRPAARMNKRILG-GRTS 875

  Fly   709 APGDWPWLVALFREDI-HVCDGTLITQDWVLTTEGCFQGQPRA-TWMAIVGAVRLSAKAPWTQRR 771
            .||.|||..:|..|.. |:|...||.:.||||...||:|:..| .|..:.|...|...:.:.|.|
Mouse   876 RPGRWPWQCSLQSEPSGHICGCVLIAKKWVLTVAHCFEGREDADVWKVVFGINNLDHPSGFMQTR 940

  Fly   772 RIIGMIKSP-----VEGSTAALVRLETPVSYSDHVRPICLPDALQRRLLQQPPAQRRSHVPVAER 831
            .:..::..|     |.....::|.|...::.:.:|||:||                         
Mouse   941 FVKTILLHPRYSRAVVDYDISVVELSDDINETSYVRPVCL------------------------- 980

  Fly   832 LEGQLVSQQRSRLSQENQQFFLIPSQEQQDSSTENQGDEDQDEQEDHFGGESAASYMPKAEALHQ 896
                                   ||.|:                                     
Mouse   981 -----------------------PSPEE------------------------------------- 985

  Fly   897 ELDGYPLPDHAPQVNYYSSSSTVTSSSTAARIATKAPILAAVPAAQEQIWTNCNTLGWSRQRD-- 959
                |..||                                         |.|...||....:  
Mouse   986 ----YLEPD-----------------------------------------TYCYITGWGHMGNKM 1005

  Fly   960 --HLQRVQLKMGDMAPCEN-VSIATVNSMCMEATYQK---YDCTQEEYSGAPVQCLIPGTNQWAL 1018
              .||..::::..:..|:: ..:.|:.:..:.|.|:.   ..|..:  ||.|:.|..|| .||.|
Mouse  1006 PFKLQEGEVRIIPLEQCQSYFDMKTITNRMICAGYESGTVDSCMGD--SGGPLVCERPG-GQWTL 1067

  Fly  1019 IGVSSWRIACGPTGVERPRMYDKIASNAAWIRETI 1053
            .|::||...|. :.|..|.:|..::....||...|
Mouse  1068 FGLTSWGSVCF-SKVLGPGVYSNVSYFVGWIERQI 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_001245577.1 SEA 232..327 CDD:279699
CRD_FZ 384..502 CDD:143549 38/152 (25%)
PRKCSH-like <503..>582 CDD:193472 30/96 (31%)
LDLa 536..571 CDD:238060 16/34 (47%)
Tryp_SPc 708..>809 CDD:304450 34/107 (32%)
CorinNP_058565.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..202
CRD_corin_1 202..331 CDD:143554
LDLa 337..372 CDD:238060
LDLa 374..408 CDD:238060
Ldl_recept_a 415..445 CDD:278486
LDLa 455..482 CDD:238060
CRD_corin_2 522..643 CDD:143579 36/124 (29%)
Ldl_recept_a 648..682 CDD:278486 4/33 (12%)
LDLa <695..720 CDD:238060 9/24 (38%)
LDLa 723..757 CDD:238060 16/34 (47%)
SR 758..853 CDD:214555 19/124 (15%)
Tryp_SPc 868..1097 CDD:214473 68/363 (19%)
Tryp_SPc 869..1100 CDD:238113 70/365 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 207 1.000 Inparanoid score I3708
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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