DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1632 and Corin

DIOPT Version :9

Sequence 1:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:1271 Identity:235/1271 - (18%)
Similarity:388/1271 - (30%) Gaps:503/1271 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RDADKSSATLSATNTNANAVNLSAADKKNNNN--------NCSNRNKEKSMQANGKNWKGI---- 68
            |||.:..|.|:           .|..|.||||        :.||.|...|:.::|.....:    
  Fly   349 RDAYRERAVLN-----------DAMHKLNNNNTSLGLALYSASNNNNGSSVASDGSQLPVVPARK 402

  Fly    69 ----VQSNPNPSGGVGTT-----AQPPKVFHNTRCTRHHKPHHSHGNGSAASAVGGAAGLANG-- 122
                |:.:.|.|..:|.|     .:|..|            ..|....|||||  |::.:::|  
  Fly   403 QPPPVKGSSNSSNSIGETQSQSSKEPSSV------------SASASTSSAASA--GSSTISSGTM 453

  Fly   123 -----------PPMEATQQRERERERDRDRERERERDRERDREREREHQLHMHQHNH-------- 168
                       ||.:|..:|....|...             |:......:......|        
  Fly   454 SSMSGPCPAVVPPTDAITKRPGPPEPPL-------------RQANVFDPVETGSRGHPPPPLTVR 505

  Fly   169 --------------GLRRKSESVLSTDS------------------------------------- 182
                          .::::.:|.||:||                                     
  Fly   506 NKLGRNKPPPITYPRMQQRQDSTLSSDSYSISSSPGYNSKLMEAPLLGSQQGGRKSNAPGSAQRQ 570

  Fly   183 ----DIRFTRRKLGDG-----QKCGCAVIAGFLIALLVAGIFVYVGYTYFRPEPLPDRVFRGRFM 238
                |:..||...|.|     .|.|.|:                       |.|.....||....
  Fly   571 TPLMDLAPTRFLGGAGGGTGSGKQGPAM-----------------------PPPRSKINFRQDST 612

  Fly   239 VLNDKWSM-------------------------------------------ELANQNSMRFQHKA 260
            :.:|.:|.                                           ||....::...|||
  Fly   613 ISSDSFSQTSSPGYNPKLMEAPLLPSLSAKRLCSAPAPIVCRQGVQHEPIEELEPPQTISPLHKA 677

  Fly   261 RDYRERINLTLRRSDLREAYEGSEILALDGSEDNNNIVVH-------FNMIFDPYAGLVSSGDLL 318
            ......:...:|..:........:...::..:.:|..:.:       |.::.:.:|.|..:|.|.
  Fly   678 AGQPSSLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNGRLKFRLFQILINAFALLAIAGGLA 742

  Fly   319 ALFHEEMTQPPQQRRHFANMTVDVASLSIKETTGLIEEPIMSSSPLGGHDETTEPVVTTTPAPPR 383
            |.|:...|      ..|.|.|: :.::.:::||...:.|                       .|.
  Fly   743 AYFNAYPT------IKFVNKTI-INTIHVEDTTSFGKNP-----------------------APG 777

  Fly   384 RCSPLELSYCR--QVGYNITTYPNLLGHASYEQLAEDVIVFRELVDGECHREAYDFVCRLLQPPC 446
            .|.|:.:.:|:  |:.||.|.:||.:||....:...|:..:..|||..|:.....|:|.|..|.|
  Fly   778 TCLPIIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKC 842

  Fly   447 DTHGSDLQPTPGQICREYCESFMAGCGG-------RLPQRFRQFFDCERFPESTGTQSC------ 498
            ...|:.:.|     |:..|...|..||.       .||    ::.:|:.|.:...::.|      
  Fly   843 GQSGATVPP-----CKTLCTETMRRCGFFFDVFGLSLP----EYLNCKLFKDFPSSEDCVGLDEV 898

  Fly   499 --------HQKPHC---VSDMQSNVQSPRLCDGYADCPDLSDERSCAFCSPNALYCGRGRACVPR 552
                    |  |.|   ..|....:....:|||:.||.|.:||..|..|.|:.:|||..: |:..
  Fly   899 REVMRAATH--PKCDGFQCDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQ-CIGT 960

  Fly   553 KARCDGKADCPDGADEKDCLSIAPLAADLLQPEPLVPYLSRFHSAGYAVFSEKGVVGK-----LC 612
            |..|||..|||.|.||::||.::....|:                |..|. |...:|:     .|
  Fly   961 KHICDGIIDCPYGQDERNCLRLSERNGDV----------------GTGVL-EVYRIGQRQWMPAC 1008

  Fly   613 AEGLEGDAKLVVRQTVSESLCKSLGYESVEIFDVQNDTERLNDYVRVLDPHAPEISFI------- 670
            .:..:       |.....::|..|||.:|      |.|..|....     |.|.::.:       
  Fly  1009 VKNWD-------RAVSPSAVCSILGYSAV------NATSVLTQLT-----HRPLLATVNVSTDIW 1055

  Fly   671 RTHCPRRQVLY----------------VGCGELRCG-VQSALFNAKQHLSLPKMSAPGDWPWLVA 718
            :.:..|:..|.                :.|....|| |:.......:.:.....::||:||:|.|
  Fly  1056 KMYAKRKSTLMQEFANCKKTEDYPMADLTCSNYECGRVKRGRHKPSRRIIGGTQASPGNWPFLAA 1120

  Fly   719 LF--REDIHVCDGTLITQDWVLTTEGC---FQGQPRATWMAIVGAVRLSAKAPWTQRRRIIGMIK 778
            :.  .|.|..|.|.||:..||||...|   :.......|...:|..|.::.....|:.::..:|.
  Fly  1121 ILGGPEKIFYCAGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIP 1185

  Fly   779 SP------VEGSTAALVRLETPVSYSDHVRPICLPDALQRRLLQQPPAQRRSHVPVAERLEGQLV 837
            .|      ...:..||.:|.|.|::.:|:.|:|||          ||:.|..|            
  Fly  1186 HPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLP----------PPSVRNLH------------ 1228

  Fly   838 SQQRSRLSQENQQFFLIPSQEQQDSSTENQGDEDQDEQEDHFGGESAASYMPKAEALHQELDGYP 902
                                                                             
  Fly  1229 ----------------------------------------------------------------- 1228

  Fly   903 LPDHAPQVNYYSSSSTVTSSSTAARIATKAPILAAVPAAQEQIWTNCNTLGWSRQRDH------- 960
                                                |.      |.|..:||.::.|.       
  Fly  1229 ------------------------------------PG------TLCTVIGWGKREDKDPKSTYE 1251

  Fly   961 --LQRVQLKMGDMAPC----ENVSIATVNSMCMEATYQKYDCTQEEYSGAPVQCLIPG-TNQWAL 1018
              :..||:.:.....|    :|::::. ..:|........|..|.: ||.|:.|..|| .|:|.:
  Fly  1252 YIVNEVQVPIITRNQCDEWLDNLTVSE-GMVCAGFDDGGKDACQGD-SGGPLLCPYPGEKNRWFV 1314

  Fly  1019 IGVSSWRIACGPTGVERPRMYDKIASNAAWIRETIS 1054
            .|:.||.|.|....:  |.:|..:.....||:|.|:
  Fly  1315 GGIVSWGIMCAHPRL--PGVYANVVQYVPWIQEQIA 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_001245577.1 SEA 232..327 CDD:279699 18/144 (13%)
CRD_FZ 384..502 CDD:143549 34/140 (24%)
PRKCSH-like <503..>582 CDD:193472 30/81 (37%)
LDLa 536..571 CDD:238060 16/34 (47%)
Tryp_SPc 708..>809 CDD:304450 33/111 (30%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 33/124 (27%)
LDLa 911..942 CDD:238060 9/30 (30%)
LDLa 945..979 CDD:238060 16/34 (47%)
SR 980..>1034 CDD:214555 14/83 (17%)
SRCR 992..1086 CDD:278931 17/112 (15%)
Tryp_SPc 1103..1343 CDD:214473 65/372 (17%)
Tryp_SPc 1104..1346 CDD:238113 67/374 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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