DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1632 and Smo

DIOPT Version :9

Sequence 1:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:NP_036939.1 Gene:Smo / 25273 RGDID:3726 Length:793 Species:Rattus norvegicus


Alignment Length:201 Identity:46/201 - (22%)
Similarity:72/201 - (35%) Gaps:45/201 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 GGHDETTEPVVTTTPAPP--------RRCSPLELSYC--RQVGYNITTYPNLLGHA-SYEQLAED 418
            ||......||  |:|.||        ..|.||..:.|  ..:.|..|| ..|.|.: |.|:....
  Rat    48 GGSARRNAPV--TSPPPPLLSHCGRAAHCEPLRYNVCLGSALPYGATT-TLLAGDSDSQEEAHSK 109

  Fly   419 VIVFRELVDG-ECHREAYDFVCRLLQPPCDTHGSDLQPTPGQICREYCESFMAGCGGRLPQRFR- 481
            ::::..|.:. .|.......:|.:..|.|:....:| |:     |..|::....|.  :.:|.| 
  Rat   110 LVLWSGLRNAPRCWAVIQPLLCAVYMPKCENDRVEL-PS-----RTLCQATRGPCA--IVERERG 166

  Fly   482 --QFFDC--ERFPESTGTQSCHQKPHCVSDMQS-NVQSPRLCDG---YADCPD--LSDERSCAFC 536
              .|..|  :.|||.           |.:::|: ...|...|:.   ..|.|.  ..|...|...
  Rat   167 WPDFLRCTPDHFPEG-----------CPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQ 220

  Fly   537 SPNALY 542
            ..|.|:
  Rat   221 CQNPLF 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_001245577.1 SEA 232..327 CDD:279699
CRD_FZ 384..502 CDD:143549 28/126 (22%)
PRKCSH-like <503..>582 CDD:193472 10/46 (22%)
LDLa 536..571 CDD:238060 2/7 (29%)
Tryp_SPc 708..>809 CDD:304450
SmoNP_036939.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..61 5/14 (36%)
CRD_SMO 70..200 CDD:143560 32/149 (21%)
Frizzled 225..554 CDD:279827 1/2 (50%)
Interaction with BBS5 and BBS7. /evidence=ECO:0000250|UniProtKB:P56726 542..573
Interaction with DLG5. /evidence=ECO:0000250|UniProtKB:P56726 585..597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..702
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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