DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1632 and svh-1

DIOPT Version :10

Sequence 1:NP_572467.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:705 Identity:124/705 - (17%)
Similarity:203/705 - (28%) Gaps:296/705 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 DGECHREAYDFVCRLL---QP--PCDTHGSD-----LQPT-----------PGQICREYCESFMA 470
            |....||....:||:|   .|  ..::|.|:     ||||           |..:.:....|..|
 Worm   462 DDNYSREKLSSICRVLGFGDPIYTVESHQSESSLGPLQPTTLHPTNPSFDSPSSVSQMRRTSPSA 526

  Fly   471 GCGGRLPQRFRQFFDCERFPESTGTQSCHQKPHCVSDMQSNVQSPRLCDGYADCPDLSDERSCAF 535
            ....|||               ....||.::|:|.|.:.|..:..|                |:.
 Worm   527 TLAPRLP---------------AWNLSCLREPNCTSTVISTCEPIR----------------CSH 560

  Fly   536 CSPNALYCGRGRACVPRKARCDGKADCPDGADEKDCLSIAPLAADLLQPEPLVPYLSRFH----- 595
            |...|  ||.| :|:.....|:|:.||..|.||..|.:                  :.|.     
 Worm   561 CQQAA--CGDG-SCIRFDQLCNGQIDCQSGEDEDYCRA------------------NSFRLTNGS 604

  Fly   596 -SAGYAVFSEKGVVGKLCAEGLEGDAKLVVRQTVSESLCKSLGYESVEIFDVQNDTERLNDYVRV 659
             ::||.....:.....:||:.|.|        .:|.|:|               |..||.::..:
 Worm   605 DTSGYLEVLFRSRWEPICADHLNG--------KISNSIC---------------DAMRLGEHGFI 646

  Fly   660 LDPHAPEISFIRTHCP-----RRQVLYVGCGELRCGVQSALFNAKQ-HLSLPKMSA--------- 709
            |..:|...|....:|.     ||.........:.|..|:.:.:|.| .|...:::|         
 Worm   647 LSTNATISSGYNVNCDVDCSIRRSSSCTRHARISCISQNGMSSASQCGLRYVEVNARDAAKSRIA 711

  Fly   710 ---------PGDWPWLVALFRE--DIHVCDGTLITQDWVLTTEGCFQGQPR-ATWMAIVGAVRLS 762
                     ||.:||..||..:  ..|.|..:::.:..::|...||:...| :::..:||     
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG----- 771

  Fly   763 AKAPW-------------TQRRRIIGMIKSPVEGSTAALVRLETP-VSYSDHVRPICLPDALQRR 813
               .|             .||.....:.|. :.....|::.:..| :.::::.:|||||      
 Worm   772 ---DWDNNQTDGNEQIFYLQRIHFYPLYKD-IFSHDIAILEIPYPGIEFNEYAQPICLP------ 826

  Fly   814 LLQQPPAQRRSHVPVAERLEGQLVSQQRSRLSQENQQFFLIPSQEQQDSSTENQGDEDQDEQEDH 878
                                              ::.|...|.::                    
 Worm   827 ----------------------------------SKDFVYTPGRQ-------------------- 837

  Fly   879 FGGESAASYMPKAEALHQELDGYPLPDHAPQVNYYSSSSTVTSSSTAARIATKAPILAAVPAAQE 943
                                                                             
 Worm   838 ----------------------------------------------------------------- 837

  Fly   944 QIWTNCNTLGWS----RQRDHLQRVQLKMGDMAPCENVSIATVNSMCMEATYQKY-----DCTQE 999
                 |...||.    |..:.||...:.:.:...|.| |....:||...|....|     |..|.
 Worm   838 -----CVVSGWGSMGLRYAERLQAALIPIINRFDCVN-SSQIYSSMSRSAFCAGYLEGGIDSCQG 896

  Fly  1000 EYSGAPVQCLIPGTNQWALIGVSSWRIACGPTGVERPRMYDKIASNAAWIRETIS 1054
            : ||.|..|. .....:.|.||.||...|...  ::|.:|..:|...:||...|:
 Worm   897 D-SGGPFACR-REDGAFVLAGVISWGDGCAQK--KQPGIYTMVAPYLSWISAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_572467.1 SEA 232..>309 CDD:460188
CRD_FZ 384..502 CDD:143549 21/95 (22%)
PRKCSH-like <503..>582 CDD:372423 19/78 (24%)
LDLa 536..571 CDD:238060 13/34 (38%)
Tryp_SPc 708..>809 CDD:473915 26/135 (19%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566 12/34 (35%)
SR 599..681 CDD:214555 18/104 (17%)
Tryp_SPc 713..945 CDD:238113 57/375 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.