DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1632 and mom-5

DIOPT Version :9

Sequence 1:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:NP_001300437.1 Gene:mom-5 / 172856 WormBaseID:WBGene00003397 Length:570 Species:Caenorhabditis elegans


Alignment Length:162 Identity:44/162 - (27%)
Similarity:64/162 - (39%) Gaps:31/162 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 SSSPLGGHDETTEPVVTTTPAPPRRCSPLELSYCRQVGYNITTYPNLLGHASYEQLAEDVIVFRE 424
            |.|.:.|...|            |:|..:.:..|:.:.||.|.:||||||.:..:....:..|..
 Worm    24 SISSMNGFSTT------------RKCEHITIPMCKNLDYNQTVFPNLLGHTTQSEAGPAIAQFNP 76

  Fly   425 LVDGECHREAYDFVCRLLQPPCDTHGSDLQPTPGQICREYCESFMAGC-------GGRLPQRFRQ 482
            |:..:|..:...|:|.:..|.|......:||     |||.|.|...||       |.:.|.:   
 Worm    77 LIKVKCSEDIRLFLCTVYAPVCTVLEKPIQP-----CRELCLSAKNGCESLMKKFGFQWPDQ--- 133

  Fly   483 FFDCERFPESTGTQSCHQKPHCVSDMQSNVQS 514
             .||.:||.   |..|..|....|....|.:|
 Worm   134 -LDCNKFPV---TDLCVGKNSSESSNSKNYRS 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_001245577.1 SEA 232..327 CDD:279699
CRD_FZ 384..502 CDD:143549 35/124 (28%)
PRKCSH-like <503..>582 CDD:193472 3/12 (25%)
LDLa 536..571 CDD:238060
Tryp_SPc 708..>809 CDD:304450
mom-5NP_001300437.1 CRD_FZ1_like 35..147 CDD:143567 36/123 (29%)
7tmF_Frizzled_SMO 219..550 CDD:320089
TM helix 1 228..253 CDD:320089
TM helix 2 262..282 CDD:320089
TM helix 3 312..338 CDD:320089
TM helix 4 355..371 CDD:320089
TM helix 5 393..422 CDD:320089
TM helix 6 446..473 CDD:320089
TM helix 7 512..537 CDD:320089
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.