DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1632 and clcn2

DIOPT Version :9

Sequence 1:NP_001245577.1 Gene:CG1632 / 31763 FlyBaseID:FBgn0030027 Length:1056 Species:Drosophila melanogaster
Sequence 2:XP_002935192.2 Gene:clcn2 / 100488889 XenbaseID:XB-GENE-494657 Length:882 Species:Xenopus tropicalis


Alignment Length:188 Identity:45/188 - (23%)
Similarity:73/188 - (38%) Gaps:52/188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   879 FG---GESAASYMPKAEALHQELDGYPL-PDHAPQVNYYSSSSTVTSS-STA-------ARIATK 931
            ||   |||.|::.|  :.:|.:...|.: |.....|...:.|..||.: |||       .:|:..
 Frog   463 FGRLVGESMAAWFP--DGIHTDGSTYRIVPGGYAVVGAAALSGAVTHTVSTAVIVFELTGQISHI 525

  Fly   932 APILAAVPAA-------QEQIWTN---------CNTLGWSRQRDHLQRVQLKMGDMAPCENVSIA 980
            .|::.||..|       |..::.:         ...|||..|..:..||:..|     ..|:...
 Frog   526 LPVMIAVILANAVAQSLQPSLYDSIIRIKKLPYLPELGWGHQEKYNVRVEDIM-----LRNIPFV 585

  Fly   981 TVNSMCMEATYQKYDCTQEEYSGAPVQCLIPGTNQWALIGVSSWRIACGPTGVERPRM 1038
            |:||        ||...||..:...::||       ||:..:...|..|  .::|.::
 Frog   586 TLNS--------KYRDLQELLTNCHLKCL-------ALVETAESMILLG--SIDRSQL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1632NP_001245577.1 SEA 232..327 CDD:279699
CRD_FZ 384..502 CDD:143549
PRKCSH-like <503..>582 CDD:193472
LDLa 536..571 CDD:238060
Tryp_SPc 708..>809 CDD:304450
clcn2XP_002935192.2 ClC_1_like 84..561 CDD:239655 23/99 (23%)
CBS_pair_voltage-gated_CLC_euk_bac <774..824 CDD:341367
CBS repeat 781..823 CDD:341367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165163401
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.