DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and zgc:123284

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001032488.1 Gene:zgc:123284 / 641422 ZFINID:ZDB-GENE-051113-92 Length:256 Species:Danio rerio


Alignment Length:250 Identity:84/250 - (33%)
Similarity:137/250 - (54%) Gaps:10/250 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE--QAKELEDLA-KNHSNIHILEIDLRNFDA 66
            |:||.||||||.:||.||.  .....:|..||:.:  .::.|.:|| ||...:.::::|:.:..:
Zfish    10 LVTGANRGLGLEMVKQLLE--ADCSKIFAACRDTDGPNSEVLRELAKKNPDVVTLVKLDVADPAS 72

  Fly    67 YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 131
            ..:....:..:..::|||:|.|||.|.|:...:|. ..:::.:|..||.:.|:.:.:..||.|:.
Zfish    73 IKESAKKVGSLLGEKGLNLLVNNAAILPQKTMLTC-SVEDMHNTFNTNVIGPLFVIREYLPYLRA 136

  Fly   132 AAKANESQPMGVGRAAIINMSSILGSI----QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRI 192
            |.||:....|..|:||:||:|:...|:    .......::.|..||.|||..|...:.||....|
Zfish   137 AVKASGKPGMSPGKAAVINISTDAASLSMIPSMKEPFPLFPYSISKVALNMLTVYTARDLKADEI 201

  Fly   193 MCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLAW 247
            :|:|:|||||:||||...|.||...|...:::.|..|.||..||:::|.|..:.|
Zfish   202 LCISIHPGWVRTDMGSYEATLDTRESVEGMLRVIGSLTEKDQGGYMDYTGKTMPW 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 83/248 (33%)
adh_short 4..209 CDD:278532 71/210 (34%)
zgc:123284NP_001032488.1 adh_short 8..215 CDD:278532 68/207 (33%)
carb_red_sniffer_like_SDR_c 9..256 CDD:187586 83/248 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X192
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.930

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