Protein Alignment sni and RDH5

DIOPT Version :9

• Sequence 1: NP_001285012.1
• Gene: sni / 31761
• FlyBaseID: FBgn0030026
• Length: 247
• Species: Drosophila melanogaster
• Sequence 2: NP_001186700.1
• Gene: RDH5 / 5959
• HGNCID: 9940
• Length: 318
• Species: Homo sapiens
• Alignment Length: 201
• Identity: 58/201 - (28%)
• Similarity: 91/201 - (45%)
• Gaps: 21/201 - (10%)

  Fly     4 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYD 68
            :.||||:.|.|..|.   |.|.|....:..:|.....|::|:.:|.  |.:|...:|:.:..:..
Human    31 VFITGCDSGFGRLLA---LQLDQRGFRVLASCLTPSGAEDLQRVAS--SRLHTTLLDITDPQSVQ 90

  Fly    69 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAA 133
            :....:|...|:.||..|.||||:|........:...:....|..||:.||.:..|.||||::|
Human    91 QAAKWVEMHVKEAGLFGLVNNAGVAGIIGPTPWLTRDDFQRVLNVNTMGPIGVTLALLPLLQQA- 154

  Fly   134 KANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLH 198
                       |..:||::|:||.:..|..|    |..||..|.|.:.||..|:....|....:.
Human   155 -----------RGRVINITSVLGRLAANGGG----YCVSKFGLEAFSDSLRRDVAHFGIRVSIVE 204

  Fly   199 PGWVKT 204
            ||:.:|
Human   205 PGFFRT 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sni	NP_001285012.1	carb_red_sniffer_like_SDR_c	4..247	CDD:187586	58/201 (29%)
		adh_short	4..209	CDD:278532	58/201 (29%)
RDH5	NP_001186700.1	type2_17beta_HSD-like_SDR_c	30..306	CDD:187665	58/201 (29%)
		PRK08017	31..308	CDD:181198	58/201 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0.928771	Normalized mean entropy	S2670
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.860