DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and si:dkey-12e7.4

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001137514.1 Gene:si:dkey-12e7.4 / 558132 ZFINID:ZDB-GENE-050419-83 Length:256 Species:Danio rerio


Alignment Length:251 Identity:107/251 - (42%)
Similarity:164/251 - (65%) Gaps:8/251 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDA 66
            ::::|||.:|||||.:|::|:.....|..:..|.||...||||:.||:.:.||||:::|:.:.::
Zfish     9 SNLMITGASRGLGLQIVESLVTGGFSPGKIIATARNPNGAKELQRLAEEYQNIHIIKLDVISQES 73

  Fly    67 YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 131
            .::..|::|.:.:::|||.|.||||| ...|.:..|.:.::|:...||:|.|:|:.||.|||||:
Zfish    74 IERAAAEVEELVQEEGLNCLINNAGI-NVVANLETVTADQMLENFHTNSVAPLMITKAMLPLLKR 137

  Fly   132 AAKANESQPMGVGRAAIINMSSILGSIQ---GNTDGGM--YAYRTSKSALNAATKSLSVDLYPQR 191
            ||.  :...||:.|||:||::|:|||::   |:.....  |.|||||||||..|:.|:|||....
Zfish   138 AAA--KGTGMGIHRAAVINVTSLLGSVELYWGDRADTFKWYPYRTSKSALNMVTRCLAVDLEADG 200

  Fly   192 IMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLAW 247
            |:|::||||||:|||||..|||....|...::..|..|.||.:|.|::|.|..|.|
Zfish   201 ILCMALHPGWVRTDMGGPEAPLSPEESISSVLSVIGGLTEKDHGSFLHYTGETLPW 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 106/247 (43%)
adh_short 4..209 CDD:278532 92/209 (44%)
si:dkey-12e7.4NP_001137514.1 carb_red_sniffer_like_SDR_c 12..256 CDD:187586 106/246 (43%)
adh_short 13..218 CDD:278532 92/207 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3492
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 208 1.000 Inparanoid score I3666
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm26216
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - LDO PTHR43544
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X192
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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