DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and zgc:110339

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001017792.1 Gene:zgc:110339 / 550490 ZFINID:ZDB-GENE-050417-323 Length:255 Species:Danio rerio


Alignment Length:249 Identity:111/249 - (44%)
Similarity:156/249 - (62%) Gaps:7/249 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 67
            |:||||.:|||||.:||.||..|:.||.:..|.||...|:||:.|||.|.::||:.:|:.|..:.
Zfish    10 SVLITGASRGLGLQMVKQLLATPERPQKIIATVRNPAAAEELQKLAKAHPDVHIVTLDISNETSV 74

  Fly    68 DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKA 132
            :.....:|.:....|||.|.|||.|. .|:.:.:|....::.|.::|||.|:.:.||.||||::|
Zfish    75 NAASQAVEAIVGANGLNCLINNAAIG-MSSDLDSVTRDVMMKTYESNTVSPLFVTKALLPLLRRA 138

  Fly   133 AKANESQPMGVGRAAIINMSSILGSIQGNTDGG----MYAYRTSKSALNAATKSLSVDLYPQRIM 193
            |.  |...|.:.|||::|:||:|||:|.|...|    .||||.||||||..|:.|:.||....|:
Zfish   139 AA--EGSGMSIQRAAVVNVSSLLGSVQLNWGEGASFKSYAYRASKSALNMVTRCLAADLEADGIL 201

  Fly   194 CVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLAW 247
            ||:||||||:|||||..|||....|...::..|:.|.|:.:||:|:|.|..|.|
Zfish   202 CVALHPGWVRTDMGGPMAPLSPEESISSVLSVIAGLKEEHHGGYVDYTGKNLPW 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 109/246 (44%)
adh_short 4..209 CDD:278532 95/208 (46%)
zgc:110339NP_001017792.1 carb_red_sniffer_like_SDR_c 11..255 CDD:187586 109/246 (44%)
adh_short 11..217 CDD:278532 95/208 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 179 1.000 Domainoid score I3492
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 208 1.000 Inparanoid score I3666
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm26216
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1752
SonicParanoid 1 1.000 - - X192
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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