DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and CG12171

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_649563.1 Gene:CG12171 / 40690 FlyBaseID:FBgn0037354 Length:257 Species:Drosophila melanogaster


Alignment Length:216 Identity:54/216 - (25%)
Similarity:95/216 - (43%) Gaps:38/216 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILITGCNRGLGLGLVKALLNLPQPPQHLFTTC-RNREQAKELEDLAKNHSNIHILEI--DLRNFD 65
            |::||.:.|:|.|....|..|    ..|.|.. ||.::..|..:..........|::  |:.:  
  Fly     9 IIVTGASSGIGAGTSVLLAKL----GGLLTIVGRNLDKLNETAEQIVAAGGAPALQVAADINS-- 67

  Fly    66 AYDKLVADIEGV-----TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 125
                 .:|::|:     .|...::||.|||||. :...|.....::....:.||......|....
  Fly    68 -----ESDVQGIVSATLAKHGRIDVLVNNAGIL-ELGSIENTSLEQFDRVMNTNVRSLYQLTHLV 126

  Fly   126 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQ 190
            .|.|.| .|.|           |:|:||:.|.   .:..|:.||..||:|::..|:.::::|.|:
  Fly   127 TPELIK-TKGN-----------IVNVSSVNGI---RSFPGVLAYNVSKAAVDQFTRCVALELAPK 176

  Fly   191 RIMCVSLHPGWVKTDM---GG 208
            .:...|::||.:.|::   ||
  Fly   177 GVRVNSVNPGVIITELQRRGG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 54/216 (25%)
adh_short 4..209 CDD:278532 54/216 (25%)
CG12171NP_649563.1 fabG 2..251 CDD:235975 54/216 (25%)
NADB_Rossmann 4..254 CDD:304358 54/216 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435119
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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