DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sni and CG9150

DIOPT Version :10

Sequence 1:NP_572466.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_608991.2 Gene:CG9150 / 33856 FlyBaseID:FBgn0031775 Length:251 Species:Drosophila melanogaster


Alignment Length:213 Identity:47/213 - (22%)
Similarity:91/213 - (42%) Gaps:30/213 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-HSNIHILEIDLRNFD-- 65
            ::||.:.|:|....:|::.   ....:....|...:.||| |.|.:. .:|......|:...|  
  Fly    10 VVTGASGGIGAACARAMIG---AGLRVVGLARREAKLKELRESLPRELQANFIPRRCDVSKEDQV 71

  Fly    66 --AYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL 128
              ::|.:..::||.      :||.|||||..::..:|...:|:|.:.:.||.:..|...:.....
  Fly    72 QSSFDWIERELEGA------DVLLNNAGITRETELVTPSNTQKLKEVIDTNVMGVIWCTREAFNN 130

  Fly   129 LKKAAKANESQPMGVGRAA---IINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSL--SVDLY 188
            :|:  :..|...:.:...|   ::|...:|.|..        .|..:|.|:.|.|::.  ...|:
  Fly   131 MKR--RGGEGHVLIINSIAGHQVLNFIDVLPSFN--------IYPATKFAITAITETYRQEFQLH 185

  Fly   189 PQRIMCVSLHPGWVKTDM 206
            ..:|....:.||.|.|::
  Fly   186 SNKIRVTGICPGAVNTNI 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_572466.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 47/213 (22%)
CG9150NP_608991.2 Rossmann-fold NAD(P)(+)-binding proteins 1..247 CDD:473865 47/213 (22%)

Return to query results.
Submit another query.