DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sni and CG40485

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_001036313.1 Gene:CG40485 / 3355165 FlyBaseID:FBgn0069973 Length:247 Species:Drosophila melanogaster


Alignment Length:257 Identity:57/257 - (22%)
Similarity:110/257 - (42%) Gaps:51/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-HSNIHILEIDLRNFDAY 67
            ::||.:.|:|..:.:.|::   ....:....|..::.::| |:|.:: .|.:.|::.|:.:..:.
  Fly    10 VVTGASSGIGAAITRKLIS---AGVMVVALARRMDRLEQLREELPQDRRSRLRIMQCDVSDVSSV 71

  Fly    68 DKLVADIEGVTKDQG-LNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 131
            :.:...::|   |.| :::|.||||.......:|.     .:||:|......:|....|      
  Fly    72 NAVFDAVQG---DLGNVDILINNAGKLSGGQLLTM-----SVDTVQQMLQTNVMGVVYC------ 122

  Fly   132 AAKANESQPMGVGRAAIINMSSILGSIQGNTDGG----MYAYRTSKSALNAATKSLSVDL--YPQ 190
            ..:|.||......:..::.::||:|....|...|    :..|..:|.|:.|.|:....::  :..
  Fly   123 TQRAFESMRQRQSKGHVVLINSIVGHYIFNPLPGSQQELNMYPATKHAITALTELFRQEMRDFKT 187

  Fly   191 RIMCVSLHPGWVKTDMGGSSAPLD---VP--------------TSTGQIVQ----TISKLGE 231
            ::...|:.||.|.|::    .|||   :|              .||...||    ||..|||
  Fly   188 KVKVTSISPGLVDTEL----VPLDYKGLPMLQAEDVANAIMYVLSTPPHVQVHELTIKPLGE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 57/257 (22%)
adh_short 4..209 CDD:278532 44/212 (21%)
CG40485NP_001036313.1 YdfG 1..247 CDD:226674 57/257 (22%)
NADB_Rossmann 1..242 CDD:304358 54/252 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435175
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.