DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and SPCC663.08c

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_588269.1 Gene:SPCC663.08c / 2538733 PomBaseID:SPCC663.08c Length:253 Species:Schizosaccharomyces pombe


Alignment Length:256 Identity:72/256 - (28%)
Similarity:121/256 - (47%) Gaps:34/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKL 70
            |.|.|||:||.|||.|.|  :....:|.:.|....|.:|::.:|:|||:||:::|:.:.::.::.
pombe    10 IAGGNRGIGLSLVKELSN--RKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVSSLESANEA 72

  Fly    71 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 135
            ..::..|.  ..::||:.|:.:......:............:||.:.||.:.:|..||:||    
pombe    73 AQEVTKVV--DAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAFYPLIKK---- 131

  Fly   136 NESQPMGVGRAAIINM-SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP 199
                    ||:.||.. ||:.||:.........||..||:|||...|.:|.:|..:..:.:|:||
pombe   132 --------GRSKIIVFTSSLAGSMGAFFPSSQSAYGQSKAALNYTMKEISFELQDEGFIVISIHP 188

  Fly   200 GWVKTDMGG-----------------SSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT 243
            |.|:||...                 :...|....|...:::.:..|..:.||.|.|||||
pombe   189 GAVRTDSAQEIVNQHAEKKPEILDLFAKQALTPEKSASDMLKVVDNLKPENNGLFYNYDGT 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 72/256 (28%)
adh_short 4..209 CDD:278532 61/220 (28%)
SPCC663.08cNP_588269.1 adh_short 6..199 CDD:278532 61/204 (30%)
carb_red_sniffer_like_SDR_c 8..253 CDD:187586 72/256 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 95 1.000 Domainoid score I1937
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 102 1.000 Inparanoid score I1640
OMA 1 1.010 - - QHG53570
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm47301
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - LDO PTHR43544
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1752
SonicParanoid 1 1.000 - - X192
TreeFam 1 0.960 - -
1413.860

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