DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and F20G2.2

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_506407.1 Gene:F20G2.2 / 184743 WormBaseID:WBGene00008986 Length:249 Species:Caenorhabditis elegans


Alignment Length:250 Identity:101/250 - (40%)
Similarity:145/250 - (57%) Gaps:18/250 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 67
            |:||||.|||:||||:|..|. .:..|.:..|||:..:|:||.:|  ..|.:|||.:|:...::.
 Worm     5 SLLITGANRGIGLGLLKQFLK-HKDIQIIIATCRDPSKAEELSNL--KDSRLHILPLDIDCDESI 66

  Fly    68 DKLVADIEGVTKDQGLNVLFNNAGI------APKSARITAVRSQELLDTLQTNTVVPIMLAKACL 126
            .||.|::|.:..:.||.||.|||||      ..:..|.|.:|.      |:||:|...::.:..|
 Worm    67 SKLYAEVEKLVGEDGLTVLLNNAGILLPYDVEGEKNRKTLIRQ------LETNSVSTALITQEFL 125

  Fly   127 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQ---GNTDGGMYAYRTSKSALNAATKSLSVDLY 188
            |||||||..|......:.||||:|:||...|::   |..:|.:.|||.||||||:..||.|:||.
 Worm   126 PLLKKAAAKNGGDGYSINRAAIVNISSTAASVEKIDGTFNGPLVAYRMSKSALNSFAKSCSIDLA 190

  Fly   189 PQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT 243
            ...|:..|..||||||.|||::|.|::..:|..:...|..||...:|.::|.|.|
 Worm   191 KYHILVTSFCPGWVKTGMGGANAMLEIEDATKTLSDNILTLGNAHHGAYLNADLT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 99/248 (40%)
adh_short 4..209 CDD:278532 89/213 (42%)
F20G2.2NP_506407.1 carb_red_sniffer_like_SDR_c 7..248 CDD:187586 99/247 (40%)
adh_short 7..208 CDD:278532 87/209 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I2769
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 167 1.000 Inparanoid score I2782
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm14367
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1752
SonicParanoid 1 1.000 - - X192
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.910

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