DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and F20G2.1

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_506406.1 Gene:F20G2.1 / 184742 WormBaseID:WBGene00008985 Length:249 Species:Caenorhabditis elegans


Alignment Length:250 Identity:100/250 - (40%)
Similarity:147/250 - (58%) Gaps:18/250 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 67
            ||||||.|||:||||:|..:. .:..|.:..|||:...|.||..:  ..:.:|||::|:...|:.
 Worm     5 SILITGANRGIGLGLLKQFIK-NKDVQIIIGTCRDPSNATELNSI--KDTRVHILQLDIDCDDSI 66

  Fly    68 DKLVADIEGVTKDQGLNVLFNNAGI-AP-----KSARITAVRSQELLDTLQTNTVVPIMLAKACL 126
            .||.|::|.:..:.||.||.||||| .|     :.:|.|.:|.      |:|||:..:::.:..|
 Worm    67 RKLGAEVEKLVGEDGLTVLINNAGIFVPYDIDGEKSRSTLIRQ------LETNTISTVLITQELL 125

  Fly   127 PLLKKAAKANESQPMGVGRAAIINMSSILGS---IQGNTDGGMYAYRTSKSALNAATKSLSVDLY 188
            ||||:||..|..:...:.|:||||:||..||   |..:.:..:.|||.||||||:..||.||||.
 Worm   126 PLLKRAAAKNRGEGYSINRSAIINISSTAGSITKIDASYNIPLVAYRMSKSALNSFGKSCSVDLA 190

  Fly   189 PQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT 243
            ...|:..:..||||||||||::..|::..:|..:...|..||:..:|.::|.|.|
 Worm   191 KYHILVTTFCPGWVKTDMGGANGKLEIDDATKTLSDNILILGDAHHGAYLNADLT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 98/248 (40%)
adh_short 4..209 CDD:278532 89/213 (42%)
F20G2.1NP_506406.1 adh_short 4..208 CDD:278532 87/211 (41%)
carb_red_sniffer_like_SDR_c 6..248 CDD:187586 98/248 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 147 1.000 Domainoid score I2769
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 167 1.000 Inparanoid score I2782
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm14367
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1752
SonicParanoid 1 1.000 - - X192
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.870

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