DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and F20G2.1

DIOPT Version :10

Sequence 1:NP_572466.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_506406.1 Gene:F20G2.1 / 184742 WormBaseID:WBGene00008985 Length:249 Species:Caenorhabditis elegans


Alignment Length:250 Identity:100/250 - (40%)
Similarity:147/250 - (58%) Gaps:18/250 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 67
            ||||||.|||:||||:|..:. .:..|.:..|||:...|.||..:  ..:.:|||::|:...|:.
 Worm     5 SILITGANRGIGLGLLKQFIK-NKDVQIIIGTCRDPSNATELNSI--KDTRVHILQLDIDCDDSI 66

  Fly    68 DKLVADIEGVTKDQGLNVLFNNAGI-AP-----KSARITAVRSQELLDTLQTNTVVPIMLAKACL 126
            .||.|::|.:..:.||.||.||||| .|     :.:|.|.:|.      |:|||:..:::.:..|
 Worm    67 RKLGAEVEKLVGEDGLTVLINNAGIFVPYDIDGEKSRSTLIRQ------LETNTISTVLITQELL 125

  Fly   127 PLLKKAAKANESQPMGVGRAAIINMSSILGS---IQGNTDGGMYAYRTSKSALNAATKSLSVDLY 188
            ||||:||..|..:...:.|:||||:||..||   |..:.:..:.|||.||||||:..||.||||.
 Worm   126 PLLKRAAAKNRGEGYSINRSAIINISSTAGSITKIDASYNIPLVAYRMSKSALNSFGKSCSVDLA 190

  Fly   189 PQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT 243
            ...|:..:..||||||||||::..|::..:|..:...|..||:..:|.::|.|.|
 Worm   191 KYHILVTTFCPGWVKTDMGGANGKLEIDDATKTLSDNILILGDAHHGAYLNADLT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_572466.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 98/248 (40%)
F20G2.1NP_506406.1 carb_red_sniffer_like_SDR_c 6..248 CDD:187586 98/248 (40%)

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