DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and C55A6.3

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_505919.3 Gene:C55A6.3 / 183832 WormBaseID:WBGene00008332 Length:250 Species:Caenorhabditis elegans


Alignment Length:250 Identity:92/250 - (36%)
Similarity:143/250 - (57%) Gaps:15/250 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALL---NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNF 64
            |:::||.|||:||||||..:   |:    :|:..|.|:.|:|.:|:.:  |...:|::.:.|...
 Worm     5 SVVVTGANRGIGLGLVKQFVKDKNI----RHIIATARDVEKATDLKSI--NDPRLHVIPLALTCD 63

  Fly    65 DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLL 129
            .:.||.|:.:..:....|||:|.||||.|.|.:........:|::....||...::|::..||||
 Worm    64 KSMDKFVSKVGDIVGSDGLNLLVNNAGSAVKYSTKAEPSRAKLVEQFDVNTFSVVILSQKLLPLL 128

  Fly   130 KKAAKANESQPMGVGRAAIINMSSILGSIQGNTDG-----GMYAYRTSKSALNAATKSLSVDLYP 189
            .||:.......:.|.|||::.:||.||||..||.|     |: |||.||||:|...::.::|:..
 Worm   129 TKASSKVSGDELSVSRAAVVTISSGLGSITENTSGSGVIEGL-AYRMSKSAVNMFARTFAIDMKD 192

  Fly   190 QRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP 244
            ..|:..:..||||:|||||..|.|.|..||.|:|.:.:||.:..|||:...:.||
 Worm   193 DYILAANFCPGWVQTDMGGKHAALTVEQSTSQLVSSFNKLDKTHNGGYFRNNLTP 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 90/248 (36%)
adh_short 4..209 CDD:278532 76/212 (36%)
C55A6.3NP_505919.3 carb_red_sniffer_like_SDR_c 6..241 CDD:187586 89/241 (37%)
adh_short 6..212 CDD:278532 76/212 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166327
Domainoid 1 1.000 147 1.000 Domainoid score I2769
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 167 1.000 Inparanoid score I2782
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm14367
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X192
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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