DRSC/TRiP Functional Genomics Resources

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Protein Alignment sni and dhs-12

DIOPT Version :9

Sequence 1:NP_001285012.1 Gene:sni / 31761 FlyBaseID:FBgn0030026 Length:247 Species:Drosophila melanogaster
Sequence 2:NP_501850.1 Gene:dhs-12 / 177888 WormBaseID:WBGene00000975 Length:255 Species:Caenorhabditis elegans


Alignment Length:244 Identity:89/244 - (36%)
Similarity:137/244 - (56%) Gaps:8/244 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAY 67
            :|.|||.|||:|||||:.||.:| ..:.|....||.:.||||:.|||..:.:|::.:|:.|..:.
 Worm     5 TIFITGANRGIGLGLVRELLKVP-GVEALVAGARNIDGAKELQSLAKADARLHLIAVDVSNDGSL 68

  Fly    68 DKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKA 132
            :..|..:.|:..|:|||:|.||||:.......:|.....:|..:..|.|..::.::..||||:||
 Worm    69 ENSVKSVSGIVGDRGLNLLINNAGLIESYGTTSAPNRASVLHCIDVNAVSALLASQHFLPLLQKA 133

  Fly   133 AKANESQPMGVGRAAIINMSSILGSIQGNTDG-----GMYAYRTSKSALNAATKSLSVDLYPQRI 192
            |.......:...||||:|:.|...|...|..|     .:.||:.||.|:.:.::|::.|.....|
 Worm   134 ASHVSGDSLTPDRAAIVNIGSDCASQALNLRGSGPSNSLLAYKMSKVAMLSFSRSMAADFKRLEI 198

  Fly   193 --MCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVN 239
              :..::|||||:||||||:|.:.|..|..:||.:|:||.....||..|
 Worm   199 PVLITNIHPGWVQTDMGGSNAEISVDESVTKIVASIAKLNGGHQGGLFN 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sniNP_001285012.1 carb_red_sniffer_like_SDR_c 4..247 CDD:187586 89/243 (37%)
adh_short 4..209 CDD:278532 76/211 (36%)
dhs-12NP_501850.1 adh_short 4..217 CDD:278532 76/212 (36%)
carb_red_sniffer_like_SDR_c 6..254 CDD:187586 89/243 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1611
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H71144
Inparanoid 1 1.050 167 1.000 Inparanoid score I2782
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000614
OrthoInspector 1 1.000 - - otm14367
orthoMCL 1 0.900 - - OOG6_100338
Panther 1 1.100 - - O PTHR43544
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X192
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.880

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