DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr1 and mtLPD2

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_566570.3 Gene:mtLPD2 / 820984 AraportID:AT3G17240 Length:507 Species:Arabidopsis thaliana


Alignment Length:502 Identity:142/502 - (28%)
Similarity:227/502 - (45%) Gaps:64/502 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TKG----GSYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCI 168
            |:|    ||.|.|:::||||..|...|.:|...|.:..|::         .:..:||||:|||||
plant    33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIE---------KRGALGGTCLNVGCI 88

  Fly   169 PKK-LMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYIN 232
            |.| |:|.:.:..||.|..|.:|..| ..::.|...::......:|::........:..||.|:.
plant    89 PSKALLHSSHMYHEAKHVFANHGVKV-SSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVK 152

  Fly   233 GLGSFVDSHTLLAKLKSGERTIT-AQTFVIAVGGRPRYPDIPGAVEYGITSDD--------LFSL 288
            |.|.|:....:......||..:. .:..::|.|...:  .:|     |||.|:        ..||
plant   153 GYGKFLSPSEVSVDTIDGENVVVKGKHIIVATGSDVK--SLP-----GITIDEKKIVSSTGALSL 210

  Fly   289 DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGFDQQMAELVAASMEERGIPFLRK 352
            ...|.|.:|:||||||||.......||.|.||: ..:.::...|.::.:....|:|::.:.|:.|
plant   211 TEIPKKLIVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPAMDGEIRKQFQRSLEKQKMKFMLK 275

  Fly   353 TVPLSVEKQDDG-KLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPV 415
            |..:.|:...|| ||:|  :..|.||:.....|.||.:.||......|:|...||...| .:|.|
plant   276 TKVVGVDSSGDGVKLIV--EPAEGGEQTTLEADVVLVSAGRTPFTSGLDLEKIGVETDKGGRILV 338

  Fly   416 DSQEATNVANIYAVGDIIYG-----KPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPL 475
            :.:.:|||:.:||:||:|.|     |.|...||.:       ....|....:||..|...|:|..
plant   339 NERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACV-------EFIAGKHGHVDYDKVPGVVYTYP 396

  Fly   476 EYACVGLSEEDAVKQFGADEIEVFHGYYKPTEF-FIPQKSVRYC-----YLKAVAERHGDQRVYG 534
            |.|.||.:||. :|:.|..        |...:| |:.....:..     .:|.:|::..| ::.|
plant   397 EVASVGKTEEQ-LKKEGVS--------YNVGKFPFMANSRAKAIDTAEGMVKILADKETD-KILG 451

  Fly   535 LHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAI 581
            :|.:.|.|||:|.....|:....:...:......|||.:|.....|:
plant   452 VHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAIKEAAM 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422 15/55 (27%)
TGR 113..595 CDD:273624 138/493 (28%)
mtLPD2NP_566570.3 Pyr_redox_2 41..507 CDD:476868 139/494 (28%)

Return to query results.
Submit another query.