DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trxr1 and Aifm3

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:XP_006522653.1 Gene:Aifm3 / 72168 MGIID:1919418 Length:610 Species:Mus musculus


Alignment Length:504 Identity:105/504 - (20%)
Similarity:185/504 - (36%) Gaps:131/504 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RAAMYAQPVRKMSTK------GGSYDYDLIVIGGGSAGLACAKEAVLNGAR---VAC-LDFVKPT 149
            :.|:..|...|:..|      |.|...:::::|.|:|||.||:.....|..   |.| ||...|.
Mouse   169 KQALQLQRRTKVMAKCISPSAGHSSSTNVLIVGAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPY 233

  Fly   150 PTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKS 214
            ........:......:...||:...             |||           .:::...|     
Mouse   234 DRAKLSKSLDAQPEQLALRPKEFFR-------------AYG-----------IEMLTEAQ----- 269

  Fly   215 VNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYG 279
               |..||:|:|||.:.:|..  ::...||....|..:|:|.:                     |
Mouse   270 ---VVTVDVRNKKVVFKDGFK--LEYSKLLLAPGSSPKTLTCK---------------------G 308

  Fly   280 ITSDDLFSLDREP-----------GK-TLVVGAGYIGLECAGFLKGLGYEPTVM-VRSIVLRGF- 330
            ...:::|:: |.|           |: .:|||||::|:|.|.:|....:..:|: :.....|.| 
Mouse   309 KDVENVFTI-RTPEDANRVLRLARGRNAVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFL 372

  Fly   331 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL---LVKYKNVETGEEAEDVYDTVLWAIGR 392
            .:::...:....|...:.|..:| .:|..:..:|||   ::|...|...    ||....:.|:..
Mouse   373 GERVGRALMKMFENNRVKFYMQT-EVSELRAQEGKLQEVVLKSSKVLRA----DVCVLGIGAVPA 432

  Fly   393 KGLVDDLNLPNAGVTV-QKDKIPVDSQEATNVANIYAVGDII-------YGKPELTP---VAVLA 446
            .|.     |..:|:.: .:..|||:....|||..::|.||.:       ..:....|   :|...
Mouse   433 TGF-----LRQSGIGLDSRGFIPVNKMMQTNVPGVFAAGDAVTFPLAWRNNRKVNIPHWQMAHAQ 492

  Fly   447 GRLLARRLYGGSTQRMDYKDVATTVF-TPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFI 510
            ||:.|:.:.....:......:.|.:| ..|.||..|...:|.:.|...:|:: |..:|..::..|
Mouse   493 GRVAAQNMLAQEAEINTVPYLWTAMFGKSLRYAGYGEGFDDVIIQGDLEELK-FVAFYTKSDEVI 556

  Fly   511 PQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTI 559
            ...|:.|                     .|:..:|    |..|.||..|
Mouse   557 AVASMNY---------------------DPIVSKV----AEVLASGRAI 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422 19/74 (26%)
TGR 113..595 CDD:273624 99/480 (21%)
Aifm3XP_006522653.1 Rieske_AIFL_N 70..163 CDD:239560
NirB 194..562 CDD:440863 91/434 (21%)
Blue background indicates that the domain is not in the aligned region.

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