DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trxr-1 and Txnrd1

DIOPT Version :9

Sequence 1:NP_727251.1 Gene:Trxr-1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001338913.1 Gene:Txnrd1 / 58819 RGDID:61959 Length:580 Species:Rattus norvegicus


Alignment Length:546 Identity:286/546 - (52%)
Similarity:361/546 - (66%) Gaps:25/546 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QRG-SRDSTGATGGNAPAGSGAGAPPPFQHPHCDRAAMYAQPVRKMSTKGG------SYDYDLIV 119
            :|| .|...|...|.|..|.|....|       ::..:    :||:||...      |||:|||:
  Rat    45 RRGRGRRRAGRRRGRAEGGHGPALKP-------NKKGL----LRKLSTMNDSKDAPKSYDFDLII 98

  Fly   120 IGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVH 184
            |||||.|||.||||.....:|..||||.||| |||:||:||||||||||||||||||:|||:|:.
  Rat    99 IGGGSGGLAAAKEAAKFDKKVMVLDFVTPTP-LGTRWGLGGTCVNVGCIPKKLMHQAALLGQALK 162

  Fly   185 EAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKS 249
            ::..|||.:::.:|.||.|:.:||||||.|:||..||.||:|||.|.|..|.|:..|.::|....
  Rat   163 DSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNK 227

  Fly   250 G-ERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKG 313
            | |:..:|:.|:||.|.||||..|||..||.|:|||||||...|||||||||.|:.|||||||.|
  Rat   228 GKEKVYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAG 292

  Fly   314 LGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQD---DGKLLVKYKNVET 375
            :|.:.|||||||:||||||.||..:...|||.||.|:|:.||..:|:.:   .|:|.|..|:..:
  Rat   293 IGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLKVTAKSTNS 357

  Fly   376 GEEAEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK--DKIPVDSQEATNVANIYAVGDIIYGKPE 438
            .|..||.::|||.|:||......:.|...||.:.:  .||||..:|.|||..|||:|||:.||.|
  Rat   358 EETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLE 422

  Fly   439 LTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 503
            |||||:.||||||:|||||||.:.||.:|.|||||||||.|.|||||.||::||.:.|||:|.::
  Rat   423 LTPVAIQAGRLLAQRLYGGSTVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 487

  Fly   504 KPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGI 568
            .|.|:.:|.:....||.|.|.....::||.|.|.:||.||||.||||||||.|||...|.:|:||
  Rat   488 WPLEWTVPSRDNNKCYAKVVCNLKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGI 552

  Fly   569 HPTTAEEFTRLAITKRSGLDPTPASC 594
            ||..||.||.|::|||||.|...:.|
  Rat   553 HPVCAEIFTTLSVTKRSGGDILQSGC 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr-1NP_727251.1 TGR 113..595 CDD:273624 272/488 (56%)
NADB_Rossmann 115..>150 CDD:304358 21/34 (62%)
Pyr_redox 294..368 CDD:278498 44/76 (58%)
Pyr_redox_dim 468..577 CDD:280934 59/108 (55%)
Txnrd1NP_001338913.1 TGR 92..580 CDD:273624 272/488 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5175
eggNOG 1 0.900 - - E1_COG1249
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57703
OrthoDB 1 1.010 - - D164705at33208
OrthoFinder 1 1.000 - - FOG0000578
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100956
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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